LOCUS BC008615 1328 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens transketolase, mRNA (cDNA clone IMAGE:4156339),
partial cds.
ACCESSION BC008615
VERSION BC008615.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1328)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1328)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: d Column: 4.
FEATURES Location/Qualifiers
source 1..1328
/db_xref="H-InvDB:HIT000087110"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4156339"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1328
/gene="TKT"
/gene_synonym="TKT1"
/db_xref="GeneID:7086"
/db_xref="HGNC:HGNC:11834"
/db_xref="MIM:606781"
CDS <1..1188
/gene="TKT"
/gene_synonym="TKT1"
/codon_start=1
/product="TKT protein"
/protein_id="AAH08615.1"
/db_xref="GeneID:7086"
/db_xref="HGNC:HGNC:11834"
/db_xref="MIM:606781"
/translation="GQAKHQPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMAEQIIQ
EIYSQIQSKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGH
ASDRIIALDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCST
FAAFFTRAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVF
YPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDDQVT
VIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDH
YYEGGIGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAELLKMFGIDRDAIAQAVRGLI
TKA"
BASE COUNT 365 a 361 c 366 g 236 t
ORIGIN
1 ggccaggcca agcaccagcc aacagccatc attgccaaga ccttcaaggg ccgagggatc
61 acgggggtag aagataagga gtcttggcat gggaagcccc tccccaaaaa catggctgag
121 cagatcatcc aggagatcta cagccagatc cagagcaaaa agaagatcct ggcaacccct
181 ccacaggagg acgcaccctc agtggacatt gccaacatcc gcatgcccag cctgcccagc
241 tacaaagttg gggacaagat agccacccgc aaggcctacg ggcaggcact ggccaagctg
301 ggccatgcca gtgaccgcat catcgccctg gatggggaca ccaaaaattc caccttctcg
361 gagatcttca aaaaggagca cccggaccgc ttcatcgagt gctacattgc tgagcagaac
421 atggtgagca tcgcggtggg ctgtgccacc cgcaacagga cggtgccctt ctgcagcact
481 tttgcagcct tcttcacgcg ggcctttgac cagattcgca tggccgccat ctccgagagc
541 aacatcaacc tctgcggctc ccactgcggc gtttccatcg gggaagacgg gccctcccag
601 atggccctag aagatctggc tatgtttcgg tcagtcccca catcaactgt cttttaccca
661 agtgatggcg ttgctacaga gaaggcagtg gaactagccg ccaatacaaa gggtatctgc
721 ttcatccgga ccagccgccc agaaaatgcc atcatctata acaacaatga ggacttccag
781 gtcggacaag ccaaggtggt cctgaagagc aaggatgacc aggtgaccgt tatcggggct
841 ggggtgaccc tgcacgaggc cttggccgct gccgaactgc tgaagaaaga aaagatcaac
901 atccgcgtgc tggacccctt caccatcaag cccctggaca gaaaactcat tctcgacagc
961 gctcgtgcca ccaagggcag gatcctcacc gtggaggacc attattatga aggtggcatt
1021 ggtgaggctg tgtccagtgc agtagtgggc gagcctggca tcactgtcac ccacctggca
1081 gttaaccggg taccaagaag tgggaagccg gctgagctgc tgaagatgtt tggtatcgac
1141 agggatgcca ttgcacaagc tgtgaggggc ctcatcacca aggcctaggg cgggtatgaa
1201 gtgtggggcg ggggtctata cattcctgag attctgggaa aggtgctcaa agatgtactg
1261 agaggagggg taaatatatg ttttgagaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaa
//