LOCUS       BC008600                 774 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens chemokine (C-C motif) ligand 5, mRNA (cDNA clone
            MGC:17164 IMAGE:4185200), complete cds.
ACCESSION   BC008600
VERSION     BC008600.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 774)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 12 Row: m Column: 1
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 22538813.
FEATURES             Location/Qualifiers
     source          1..774
                     /db_xref="H-InvDB:HIT000033854"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:17164 IMAGE:4185200"
                     /tissue_type="Brain, glioblastoma with EGFR amplification"
                     /clone_lib="NCI_CGAP_Brn64"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..774
                     /gene="CCL5"
                     /gene_synonym="MGC17164"
                     /gene_synonym="RANTES"
                     /gene_synonym="SISd"
                     /gene_synonym="TCP228"
                     /db_xref="GeneID:6352"
                     /db_xref="HGNC:HGNC:10632"
                     /db_xref="MIM:187011"
     CDS             25..300
                     /gene="CCL5"
                     /gene_synonym="MGC17164"
                     /gene_synonym="RANTES"
                     /gene_synonym="SISd"
                     /gene_synonym="TCP228"
                     /codon_start=1
                     /product="chemokine (C-C motif) ligand 5"
                     /protein_id="AAH08600.1"
                     /db_xref="GeneID:6352"
                     /db_xref="HGNC:HGNC:10632"
                     /db_xref="MIM:187011"
                     /translation="MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPR
                     AHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLEMS"
BASE COUNT          200 a          236 c          185 g          153 t
ORIGIN      
        1 cgcacagcct ctcccacagg taccatgaag gtctccgcgg cagccctcgc tgtcatcctc
       61 attgctactg ccctctgcgc tcctgcatct gcctccccat attcctcgga caccacaccc
      121 tgctgctttg cctacattgc ccgcccactg ccccgtgccc acatcaagga gtatttctac
      181 accagtggca agtgctccaa cccagcagtc gtctttgtca cccgaaagaa ccgccaagtg
      241 tgtgccaacc cagagaagaa atgggttcgg gagtacatca actctttgga gatgagctag
      301 gatggagagt ccttgaacct gaacttacac aaatttgcct gtttctgctt gctcttgtcc
      361 tagcttggga ggcttcccct cactatccta ccccacccgc tccttgaagg gcccagattc
      421 taccacacag cagcagttac aaaaaccttc cccaggctgg acgtggtggc tcacgcctgt
      481 aatcccagca ctttgggagg ccaaggtggg tggatcactt gaggtcagga gttcgagacc
      541 agcctggcca acatgatgaa accccatctc tactaaaaat acaaaaaatt agccgggcgt
      601 ggtagcgggc gcctgtagtc ccagctactc gggaggctga ggcaggagaa tggcgtgaac
      661 ccgggaggcg gagcttgcag tgagccgaga tcgcgccact gcactccagc ctgggcgaca
      721 gagcgagact ccgtctcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//