LOCUS BC008593 2004 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens ATG2 autophagy related 2 homolog A (S. cerevisiae),
mRNA (cDNA clone IMAGE:3458856), partial cds.
ACCESSION BC008593
VERSION BC008593.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2004)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2004)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: j Column: 11.
FEATURES Location/Qualifiers
source 1..2004
/db_xref="H-InvDB:HIT000087106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3458856"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2004
/gene="ATG2A"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
CDS <1..1560
/gene="ATG2A"
/codon_start=1
/product="ATG2A protein"
/protein_id="AAH08593.1"
/db_xref="GeneID:23130"
/db_xref="HGNC:HGNC:29028"
/translation="VLREVSLVWHLYGGRDFGPHPGHRARTGLSGPRSSPSRCSGPNR
PQNSWRTQGGSGRQHHVLMEIQLSKVSFQHEVYPAEPATGPAAPSQELEERPLSRQVF
IVQELEVRDRLASSQINKFLYLHTSERMPRRAHSNMLTIKALHVAPTTNLGGPECCLR
VSLMPLRLNVDQDALFFLKDFFTSLVAGINPVVPGETSAEARPETRAQPSSPLEGQAE
GVETTGSQEAPGGGHSPSPPDQQPIYFREFRFTSEVPIWLDYHGKHVTMDQVGTFAGL
LIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPMHS
VVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQAT
AETVYDILSPAAPVSRSLQDKRSARRLRRGQQPADLREGVAKAYDTVREGILDTAQTI
CDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQIVPDAHKDH
ALKWRSDSAQD"
BASE COUNT 360 a 679 c 613 g 352 t
ORIGIN
1 gtgctacgtg aggtctccct cgtctggcac ctctatgggg gccgagactt tggcccccac
61 cccggccaca gggcaagaac tggcctctca ggtcccagga gctccccttc ccgctgctct
121 ggccccaacc ggccccagaa ctcatggcgc acgcaggggg gcagcgggcg gcagcaccat
181 gtcctcatgg agatccagct gagcaaggta agcttccagc acgaggtgta cccagcggag
241 ccagccacag gccctgcggc ccccagccag gagctggagg agcgaccgct gtcccgtcag
301 gtgttcatcg tgcaggagct ggaggtccga gaccggctcg cctcctccca gatcaacaag
361 ttcctgtacc tacacacgag tgagcggatg ccgcgacgtg cccactctaa catgctcacc
421 atcaaagcgc tgcatgtggc ccccactacc aacctgggtg ggcctgagtg ctgtctccgc
481 gtctcgctga tgcccctgcg gctcaatgtg gaccaggatg ccctcttctt cctcaaggac
541 ttcttcacta gtctggtggc cggcatcaac cccgtggtcc caggggagac ctccgctgag
601 gctcgccccg agactcgagc ccagcccagc agccccctgg aagggcaggc cgaaggcgta
661 gagaccactg gttcgcagga ggccccagga ggtggacaca gcccctcccc tcctgaccag
721 cagcccatct acttcagaga gttccgcttc acgtctgagg tccccatctg gctggattac
781 catggcaagc acgtcacgat ggaccaggtg ggcacttttg ctggcctcct catcggcctg
841 gcccaactca actgctccga gctgaagcta aagcggctct gttgcaggca cgggctcctg
901 ggtgtggaca aggtgctggg ctatgccctc aacgagtggc tgcaggacat ccgcaagaac
961 cagctgcccg gcctgctggg aggcgtgggc cccatgcact cggttgtcca gctcttccaa
1021 gggttccggg acctgctgtg gctgcccatt gagcagtaca ggaaggatgg ccgcctcatg
1081 cgggggctgc agcgaggggc tgcctccttt ggctcatcca cagcctctgc cgccctggaa
1141 ctcagcaacc ggttggtaca ggctatccag gccacagctg agaccgtgta tgacatcctg
1201 tccccggcag cccccgtctc ccgctccctg caggataagc gctctgcgcg gaggctgcgc
1261 aggggccagc agcctgccga cctgcgggag ggtgtggcca aggcctacga cacagtgcga
1321 gagggcatct tggatacagc tcagaccatc tgtgacgtgg catcgcgggg ccatgagcag
1381 aaggggctga cgggcgccgt ggggggcgtg atccgccagc tgcccccgac tgtggtgaag
1441 ccgctcatcc tggccacgga ggccacgtcc agcctgctcg ggggcatgcg caaccagatt
1501 gtccccgacg cccacaagga ccacgccctc aagtggcgct cggacagtgc ccaagactga
1561 gcctggggtg cccggcaccc agagggtgct gcccaccatg ctcctgagcc tcccaagagc
1621 tgcagcccac gggcccggcc cggcctggcc cttcagggga tggccactgt gaaggacgcc
1681 ttcccagcct gcccgttgcc aatctgctgt gagagggggg cctccctgcc ttggggcctt
1741 agccctggct ctgcactttt cctccgggga gaaaggacac tgcccctccc ccgacctggg
1801 cccacactgc tgccttctcc caggacggag gcttttggac cctcggaccc catcccactc
1861 agccaagtgt ctttctgtgt ctggggggag gaggggatga tatccgtgtg gttcgatgta
1921 ttatttttaa gctccgtgag tgcgtgggtc agtgtctgca tgaagtggaa taaactgccc
1981 accgccaaaa aaaaaaaaaa aaaa
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