LOCUS BC008590 2437 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GRAM domain containing 3, mRNA (cDNA clone MGC:16820
IMAGE:4148772), complete cds.
ACCESSION BC008590
VERSION BC008590.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2437)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2437)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: g Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12965196.
FEATURES Location/Qualifiers
source 1..2437
/db_xref="H-InvDB:HIT000033850"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16820 IMAGE:4148772"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2437
/gene="GRAMD3"
/gene_synonym="FLJ21313"
/gene_synonym="NS3TP2"
/db_xref="GeneID:65983"
/db_xref="HGNC:HGNC:24911"
CDS 164..1462
/gene="GRAMD3"
/gene_synonym="FLJ21313"
/gene_synonym="NS3TP2"
/codon_start=1
/product="GRAM domain containing 3"
/protein_id="AAH08590.1"
/db_xref="GeneID:65983"
/db_xref="HGNC:HGNC:24911"
/translation="MTELQQDVEDTKPAKVLGKRESKLGSAHSEAENGVEEKKKACRS
PTAQSPTPSVEADSPDQKKIISLWSKSSFDGASLASDKNDCKTESKNDPKTERKKSSS
SSQYKANMHFHKLFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKD
TKISIPAFSVTLIKKTKTALLVPNALIIATVTDRYIFVSLLSRDSTYKLLKSVCGHLE
NTSVGNSPNPSSAENSFRADRPSSLPLDFNDEFSDLDGVVQQRRQDMEGYSSSGSQTP
ESENSRDFHATESQTVLNVSKGEAKPTRADAHVNRVPEGKAKSLPVQGLSETVGILHK
VKSQKCPMLHHILIFYAIVVCALIISTFYMRYRINTLEEQLGLLTSIVDTHNTEQAAP
SGLRSQVQFNVEVLCQELTANIVKLEKIQNNLQKLLENGD"
BASE COUNT 732 a 537 c 529 g 639 t
ORIGIN
1 cccgggagct tggcgcggcc cggcctggat gcgctgggcg gagggtgcag gggagggcac
61 ggcgccgctt gcttggcctg cgcacccgga cctagaagcc gggacgagcc ggggcagagc
121 caggcgcgcg gaagtctgaa ggtgccctcc agacacggcc ccgatgactg aactacagca
181 agatgtggaa gacacaaagc ctgcgaaagt gctcgggaag agggagagca aacttggctc
241 agcccactca gaggctgaga atggtgtgga ggagaaaaag aaagcctgca ggtcgccaac
301 agcccaatcc cctaccccat ctgtggaggc ggactcccca gaccagaaga aaatcattag
361 cctatggtca aaatccagtt ttgatggtgc ctctttagca agtgataaga acgactgtaa
421 aacagaaagc aaaaatgacc ctaagactga aagaaaaaag tcttcatctt ccagccagta
481 caaggccaat atgcactttc acaagttgtt tcttagtgtc ccaacggagg aaccactgaa
541 gcaaagcttt acctgtgctc tacagaaaga aatactatac caaggaaagc tctttgtatc
601 agaaaactgg atttgttttc attccaaagt ctttggaaaa gacacaaaga tctctattcc
661 agctttctcg gtaaccctaa taaagaaaac caaaactgct cttctagtgc caaacgccct
721 gatcatagca acagtcacag acaggtacat atttgtctcc ttactctcca gagattcaac
781 ttacaaacta ctaaaatctg tgtgtggaca cttagaaaat acaagtgttg gtaacagtcc
841 caatccatct tctgctgaaa acagtttccg agcagaccgc ccttcatctc tgcctctgga
901 tttcaatgat gaattctcag atctggatgg agtggttcaa caaagaaggc aagacatgga
961 aggatatagc agttctggtt ctcaaactcc tgaatctgag aactctcgag atttccatgc
1021 gacagaatcc caaacagttc tgaatgtctc caagggagaa gcaaagccaa ctcgggcaga
1081 tgcccatgtg aacagagtac ctgaaggaaa agccaagagt ctccctgtac agggtctgtc
1141 agaaactgtt ggaatcttac ataaagtcaa gtctcagaaa tgtccgatgc ttcaccatat
1201 tcttatattc tatgcaattg ttgtctgtgc actaatcatc tcgaccttct acatgagata
1261 cagaattaat actctggagg agcagctggg gttactaacc tccattgtgg acacccataa
1321 tactgaacag gcagcaccat ctggcctgag gtcacaagta caattcaatg tggaggttct
1381 ctgtcaagag cttacagcta acatagtgaa attagaaaag atacaaaata acttacagaa
1441 gttgcttgag aatggtgact gatcgaccag attgcttggg ccatcggaat acctcatgtt
1501 tccctttgaa gaaggtgctt cctgaggcgt tttgtttgag tgcaccctgc tggtcagagg
1561 tgcaagcaga tgagaatcca gacattgcat gtggaggtct ccagctcagg aaagtgagga
1621 gggaaataat tttggttctt gtgcaataaa agttgacctt gactctctga ggaagatttt
1681 gctgcttttg cctgaagaaa acagacccat ctctggaggt ctcaggaagg gcccagcgaa
1741 cacactctct tggataatta ccacgatggc gtcagcaaac actccaccct gtgccttttt
1801 agtccttccc gccctcctgc ctctccctta cacccctctt aacgactttc aaactaaagg
1861 atacatcata tactgacaaa ctcaatgtgg tcctttcaag aattagccat gagtctcaaa
1921 aaggcaataa atggctctaa gtggacaggt ttgcttcaaa caagtaacat ctacattttg
1981 tctttttttt ttcagttctc ctgttatgtt ctggttgaaa tcacctgtgt gtcttaattt
2041 ctcaattcct ttttggcaag aatatcaagc aaggtgaatt taacattatg tttatgtttt
2101 gttttgttgc tgtaactaat agttaattgg actgattctt acccagccct ggtcaagaat
2161 ctgtgaggca tgtgactgaa gtactaaatt aaacttattt tgaaaccaaa cctaattttt
2221 aagccaaaag gtgtaatagt gatttaatac aggatgaaaa acactgaatt tttaagactg
2281 taggtggact atgttagtag ttttcaagca ggatgtctgt attcagcatt caataatgct
2341 aaaatccctt tcagcatgaa atttgtatgt ttttatcctt tgctgactaa aataaaataa
2401 ctggtggttt gctaactatt taaaaaaaaa aaaaaaa
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