LOCUS BC008574 1863 bp mRNA linear HUM 03-AUG-2004
DEFINITION Homo sapiens SMAD specific E3 ubiquitin protein ligase 1, mRNA
(cDNA clone IMAGE:4338957).
ACCESSION BC008574
VERSION BC008574.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1863)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1863)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1863
/db_xref="H-InvDB:HIT000087097"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4338957"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 417 a 476 c 459 g 511 t
ORIGIN
1 gaaaacagca ggccaatgtt cctatgtggt ttctttgttg ttgtttttgt ttggggtggg
61 ggcaagtaca gggtaattca tgagcaagac atttcactgc tgtcgaagtc tctgggatcc
121 cgctgtgggt ctgagatggc ctgggaagga ccttgtggac aatggtttta tctgttcttt
181 ttgtcactgt taatttctgg gctgctgagg ttctagaata gaagggctgc caaatgaggt
241 ttgctgcagg aggaaagttt aatcccccat tccaaaagtc caggccaaat ggtgggctta
301 gcctctttga aaagttctgc cttgccccca caggtgggca catcctgtgt ctcattcacc
361 atgatgcttc ctgagggtgt tctagaagcc cgttccccag tggctgtatc cagcctttcc
421 ttgcatcatc ttcctcttga aggggaggaa gtgaaaacta cagacctccc ccggacagcc
481 cactctctat cacgagccta acccgcggga ggcggaagag acatccattc gagaactgaa
541 gcggcctccg ggatgaggtc agaggcccca cctgattttc ctggtggtgg tatccaaaat
601 cttcagtaac taggaaggaa accagggtct catggtttaa aagactttga agcaggaatg
661 ttgcatttga cgcctttaaa actacctttt tgctgttggg aggagtcggg ggcgagcctt
721 agcagctgca ccgccatccc catgctggtt ggtgctgccc tgcctctcgt gccgggtgtt
781 gcttcagccc agagccagag ggctgggtcc cgggtcctcc acaggtgacc ccggtggaca
841 cacgcgttcc catcctggcc tccgtctctg cttttccact tctacctgcg tgtgggtttg
901 ccgccttgtc atcggttgtg tgagtgtcgc agacctttcc agagctccgg ttcactcttt
961 ccaaacaggc ctccctgtcg gtggcactgc actcctagaa ccttcagttt ctacgatggt
1021 ttgtttggtc cttttgaacc accccaaaga actcaacatg gcaaagcaaa tggtaaaagc
1081 ttcccgactg ttctactttg ggtccgcgcg aagcccactc acgtgtgatt tgtgttgccc
1141 ctctcggtgg tcccaggcga tccagccatg ccccctgccc ctctgcccag atgcttcagg
1201 ggcccggctt ttcaggcttg ccctcaccag cggccgtcag ccgacactca gggatgtagc
1261 taacaccact ccgccagtgc tttcagtagg aagagctgag gctgcctggg aggcccgggg
1321 cgaccggaaa agggctctct caagttctga aaagagaatc tgccaccaga tcgaatttcg
1381 acccctgagc ttgttcggac gtatggtcca aattcagatt aaggtggtca cccaacccga
1441 gatgtcagga aaggccttct gcagagaaaa tgtcccccca cccgccatct gcagccaggt
1501 gtgtgccaca cggcagcctt cccgaaacat agtatggatt ttaaaaatgt gtttattttt
1561 gtttctcaac cactttataa cgtatttttt aatttatttt gtaatgtctt gttttgaagt
1621 attgctgcta tccttgttat ccttcccact gtttttatca ctgatttatt ttgtgaaagt
1681 tgtacactaa tgttctatgt caaaatcaaa agtatttaat gaaatactag ttctatttaa
1741 tgtggttatg gaaccagctg gaaacacaaa acaaacagtg attgtacagc aggctgggcc
1801 caggaggtca ggttcatttt gttacatatg caataaactc acgactttaa aaaaaaaaaa
1861 aaa
//