LOCUS BC008572 579 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens hemoglobin, alpha 1, mRNA (cDNA clone MGC:17020
IMAGE:4177243), complete cds.
ACCESSION BC008572
VERSION BC008572.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 579)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 579)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14043068.
FEATURES Location/Qualifiers
source 1..579
/db_xref="H-InvDB:HIT000033843"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17020 IMAGE:4177243"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..579
/gene="HBA1"
/gene_synonym="CD31"
/db_xref="GeneID:3039"
/db_xref="HGNC:HGNC:4823"
/db_xref="MIM:141800"
CDS 24..452
/gene="HBA1"
/gene_synonym="CD31"
/codon_start=1
/product="hemoglobin, alpha 1"
/protein_id="AAH08572.1"
/db_xref="GeneID:3039"
/db_xref="HGNC:HGNC:4823"
/db_xref="MIM:141800"
/translation="MVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYF
PHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLL
SHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR"
BASE COUNT 115 a 208 c 156 g 100 t
ORIGIN
1 cacagactca gagagaaccc accatggtgc tgtctcctgc cgacaagacc aacgtcaagg
61 ccgcctgggg taaggtcggc gcgcacgctg gcgagtatgg tgcggaggcc ctggagagga
121 tgttcctgtc cttccccacc accaagacct acttcccgca cttcgacctg agccacggct
181 ctgcccaggt taagggccac ggcaagaagg tggccgacgc gctgaccaac gccgtggcgc
241 acgtggacga catgcccaac gcgctgtccg ccctgagcga cctgcacgcg cacaagcttc
301 gggtggaccc ggtcaacttc aagctcctaa gccactgcct gctggtgacc ctggccgccc
361 acctccccgc cgagttcacc cctgcggtgc acgcctccct ggacaagttc ctggcttctg
421 tgagcaccgt gctgacctcc aaataccgtt aagctggagc ctcggtagcc gttcctcctg
481 cccgctgggc ctcccaacgg gccctcctcc cctccttgca ccggcccttc ctggtctttg
541 aataaagtct gagtgggcgg caaaaaaaaa aaaaaaaaa
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