LOCUS BC008569 1409 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens G protein-coupled receptor 18, mRNA (cDNA clone
MGC:17339 IMAGE:4338810), complete cds.
ACCESSION BC008569
VERSION BC008569.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1409)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1409)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15029527.
FEATURES Location/Qualifiers
source 1..1409
/db_xref="H-InvDB:HIT000033842"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17339 IMAGE:4338810"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1409
/gene="GPR18"
/db_xref="GeneID:2841"
/db_xref="MIM:602042"
CDS 269..1264
/gene="GPR18"
/codon_start=1
/product="GPR18 protein"
/protein_id="AAH08569.1"
/db_xref="GeneID:2841"
/db_xref="MIM:602042"
/translation="MITLNNQDQPVPFNSSHPDEYKIAALVFYSCIFIIGLFVNITAL
WVFSCTTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILGALTV
FYPSIALWLLAFISADRYMAIVQPKYAKELKNTCKAVLACVGVWIMTLTTTTPLLLLY
KDPDKDSTPATCLKISDIIYLKAVNVLNLTRLTFFFLIPLFIMIGCYLVIIHNLLHGR
TSKLKPKVKEKSIRIIITLLVQVLVCFMPFHICFAFLMLGTGENSYNPWGAFTTFLMN
LSTCLDVILYYIVSKQFQARVISVMLYRNYLRSMRRKSFRSGSLRSLSNINSEML"
misc_feature 386..1126
/gene="GPR18"
/note="7tm_1; Region: 7 transmembrane receptor (rhodopsin
family)"
/db_xref="CDD:pfam00001"
BASE COUNT 429 a 325 c 248 g 407 t
ORIGIN
1 gaaagagaca aagcagcaat taaagtcagc ccagcaccaa ctccgacgcc aagcgttaca
61 ctggaaacta ctttttaaag caacaaaaga gtctaaaaca aaatacaaca tttcttaaat
121 acactgtttc cagaaagagc tattttaaca gaagcaactc aaagatatcc cttcgacaga
181 agtggaagtg ctgaaaaatg ctcatctctc acacagactt ttgatggaca ggagtttcta
241 agtatcatgc ctaccaacaa gctgtaaaat gatcaccctg aacaatcaag atcaacctgt
301 cccttttaac agctcacatc cagatgaata caaaattgca gcccttgtct tctatagctg
361 tatcttcata attggattat ttgttaacat cactgcatta tgggttttca gttgtaccac
421 caagaagaga accacggtaa ccatctatat gatgaatgtg gcattagtgg acttgatatt
481 tataatgact ttaccctttc gaatgtttta ttatgcaaaa gatgaatggc catttggaga
541 gtacttctgc cagattcttg gagctctcac agtgttttac ccaagcattg ctttatggct
601 tcttgccttt attagtgctg acagatacat ggccattgta cagccgaagt acgccaaaga
661 acttaaaaac acgtgcaaag ccgtgctggc gtgtgtggga gtctggataa tgaccctgac
721 cacgaccacc cctctgctac tgctctataa agacccagat aaagactcca ctcccgccac
781 ctgcctcaag atttctgaca tcatctatct aaaagctgtg aacgtgctga acctcactcg
841 actgacattt tttttcttga ttcctttgtt catcatgatt gggtgctact tggtcattat
901 tcataatctc cttcacggca ggacgtctaa gctgaaaccc aaagtcaagg agaagtccat
961 aaggatcatc atcacgctgc tggtgcaggt gctcgtctgc tttatgccct tccacatctg
1021 tttcgctttc ctgatgctgg gaacggggga gaacagttac aatccctggg gagcctttac
1081 caccttcctc atgaacctca gcacgtgtct ggatgtgatt ctctactaca tcgtttcaaa
1141 acaatttcag gctcgagtca ttagtgtcat gctataccgt aattaccttc gaagcatgcg
1201 cagaaaaagt ttccgatctg gtagtctacg gtcactaagc aatataaaca gtgaaatgtt
1261 atgaataata aggttctttc atttcaatcc catcaaaatt cacttcacta actactctgg
1321 cgtcaatgga tattctgtat aatactatca agtccctttt ctcttgaaaa aataaattca
1381 ttatcttcat tttaaaaaaa aaaaaaaaa
//