LOCUS BC008504 1781 bp mRNA linear HUM 12-OCT-2006
DEFINITION Homo sapiens centromere protein K, mRNA (cDNA clone MGC:14847
IMAGE:3511065), complete cds.
ACCESSION BC008504
VERSION BC008504.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1781)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1781)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: a Column: 1.
FEATURES Location/Qualifiers
source 1..1781
/db_xref="H-InvDB:HIT000033837"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14847 IMAGE:3511065"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1781
/gene="CENPK"
/gene_synonym="AF5alpha"
/gene_synonym="CENP-K"
/gene_synonym="FKSG14"
/gene_synonym="P33"
/gene_synonym="Solt"
/db_xref="GeneID:64105"
/db_xref="HGNC:HGNC:29479"
CDS 213..1022
/gene="CENPK"
/gene_synonym="AF5alpha"
/gene_synonym="CENP-K"
/gene_synonym="FKSG14"
/gene_synonym="P33"
/gene_synonym="Solt"
/codon_start=1
/product="centromere protein K"
/protein_id="AAH08504.1"
/db_xref="GeneID:64105"
/db_xref="HGNC:HGNC:29479"
/translation="MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEECQNKLSL
IGTETLTDSNAQLSLLIMQVKCLTAELSQWQKKTPETIPLTEDVLITLGKEEFQKLRQ
DLEMVLSTKESKNEKLKEDLEREQRWLDEQQQIMESLNVLHSELKNKVETFSESRIFN
ELKTKMLNIKEYKEKLLSTLGEFLEDHFPLPDRSVKKKKKNIQESSVNLITLHEMLEI
LINRLFDVPHDPYVKISDSFWPPYVELLLRNGIALRHPEDPTRIRLEAFHQ"
BASE COUNT 647 a 259 c 309 g 566 t
ORIGIN
1 gcagaagtcc ggggctggca agcgcttcct gcgcagcgcc taggcgacct ggagtttgtg
61 acgctgtgat ggtctagagg ctggagattc aagatctggg tgccatcatt ttctggttct
121 gttgatgacc ctcttccagg ttacatacag cttacatctt gcatcctcaa gcgtttttct
181 tataaggcta aaaattcaca aagcatatat caatgaatca ggaggatcta gatccggata
241 gtactacaga tgtgggagat gttacaaata ctgaagaaga acttattaga gaatgtgaag
301 aaatgtggaa agatatggaa gaatgtcaga ataaattatc acttattgga actgaaacac
361 tcaccgattc aaatgctcag ctatcattgt taattatgca agtaaaatgt ttaaccgctg
421 aactcagtca atggcagaaa aaaacacctg aaacaattcc cttgactgaa gacgttctca
481 taacattagg aaaagaagag ttccaaaagc tgagacaaga tcttgaaatg gtactgtcca
541 ctaaggagtc aaagaatgaa aagttaaagg aagacttaga aagggaacaa cggtggttgg
601 atgaacagca acagataatg gaatctctta atgtactaca cagtgaattg aaaaataagg
661 ttgaaacatt ttctgaatca agaatcttta atgaactgaa aactaaaatg cttaatataa
721 aagaatataa ggagaaactc ttgagtacct tgggcgagtt tctagaagac cattttcctc
781 tgcctgatag aagtgttaaa aagaaaaaga aaaacattca agaatcatct gtaaacctga
841 taacactgca tgaaatgtta gagattctta taaatagatt atttgatgtt ccacatgatc
901 catatgtcaa aattagtgat tccttttggc caccttatgt tgagctgctg ctgcgtaatg
961 gaattgcctt gagacatcca gaagatccaa cccgaataag attagaagct ttccatcagt
1021 aaaaggatgt tttctttttt cacacagtaa aaattcttat cattcaagga tattggaacc
1081 acaggactat ttggataaaa aacattattt gcaaattaat gcgcataggc catcttactt
1141 ttattgcaaa atggcatgtg ctgccatcta ttattcattt ttaaatggtc atttcttatt
1201 cagtgagtgc tttagtgttt taaactatat ggataagaat gcaggtagat aatattctag
1261 gcataaaaca tttaatgtac cttacctcat gcaatattct ttggattctt tgttgattta
1321 tgatattgct aatataatat tttcttaaaa tatataacaa tatcttttat gcattttgag
1381 ttccagctgg tgcttcttta tatttagaaa ttataatggg aaggtcattt aatttacaga
1441 tggttttaaa attgaggtaa tatctgaggt ggcataattt aaaaatattt agcaaatttg
1501 tttcatatat actgtcttat ttctagattt gtttaaaatt ggaatatgaa aaactaatgg
1561 ataaagctag cataaaattg atattttagt ttgtattatt aatatatcat gttaccttat
1621 atattaatct actcttgatt ctgctaatta ttaccaacaa aattgtattc atgacatttt
1681 attaatcctc tgtgaatttt ctgtaaataa aattatttct gaaaatctct aaaaaaaaaa
1741 aaaaaaaaaa aaagaaaaaa aaaaaaaaaa aaaaaaaaaa a
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