LOCUS BC008455 875 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens unconventional SNARE in the ER 1 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:14702 IMAGE:4247241), complete
cds.
ACCESSION BC008455
VERSION BC008455.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 875)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 875)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49574516.
FEATURES Location/Qualifiers
source 1..875
/db_xref="H-InvDB:HIT000033804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14702 IMAGE:4247241"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..875
/gene="USE1"
/gene_synonym="MDS032"
/gene_synonym="p31"
/gene_synonym="SLT1"
/db_xref="GeneID:55850"
/db_xref="HGNC:HGNC:30882"
/db_xref="MIM:610675"
CDS 9..788
/gene="USE1"
/gene_synonym="MDS032"
/gene_synonym="p31"
/gene_synonym="SLT1"
/codon_start=1
/product="unconventional SNARE in the ER 1 homolog (S.
cerevisiae)"
/protein_id="AAH08455.1"
/db_xref="GeneID:55850"
/db_xref="HGNC:HGNC:30882"
/db_xref="MIM:610675"
/translation="MAASRLELNLVRLLSRCEAMAAEKRDPDEWRLEKYVGALEDMLQ
ALKVHASKPASEVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARER
VPATKTVHLQSRARYTSEMRSELLGTDSAEPEMDVRKRTGVAGSQPVSEKQSAAELDL
VLQRHQNLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKTE
SERLEQHTQKSVNWLLWAMLIIVCFIFISMILFIRIMPKLK"
BASE COUNT 276 a 223 c 245 g 131 t
ORIGIN
1 gggcgataat ggcggcgtcg aggctggagc taaacctggt gcggctgcta tcccgctgcg
61 aggcgatggc agcggagaaa cgggacccgg acgagtggcg cctggagaag tacgtgggag
121 ccctagagga catgttgcag gccctgaagg tccacgcgag caaaccggcc tctgaggtga
181 tcaatgaata ttcctggaag gtggattttc tgaaggggat gctgcaagcc gagaagctga
241 cctcctcctc agagaaagca ctggccaacc agttcctggc ccctggccgt gtgccaacca
301 cagccagaga gcgagtgccc gccacaaaga cggtgcatct gcagtcacgg gcgcggtaca
361 ccagcgagat gcggagtgag ctactaggca cggactctgc agagcctgag atggacgtaa
421 ggaagagaac tggagtggca gggtcccagc cagtgagtga gaagcagtcg gcagctgagc
481 tagacctcgt cctgcagcga catcagaacc tccaggaaaa gctggcggaa gagatgctag
541 gactggcccg gagcctcaag accaataccc tggccgccca gagtgtcatc aagaaggaca
601 accagaccct gtcacactca ctgaaaatgg cggaccagaa cctggagaaa ctgaagacgg
661 agtcagagcg tctggagcag cacacgcaga agtcagtcaa ctggctgctc tgggccatgc
721 tcattatcgt ctgcttcatc ttcattagca tgatcctctt cattcgaatc atgcctaaac
781 tcaaataaag acccccgccc acctaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaaagaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//