LOCUS BC008320 1864 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1, mRNA (cDNA clone
MGC:15680 IMAGE:3350209), complete cds.
ACCESSION BC008320
VERSION BC008320.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1864)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1864)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: n Column: 19.
FEATURES Location/Qualifiers
source 1..1864
/db_xref="H-InvDB:HIT000033721"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15680 IMAGE:3350209"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1864
/gene="HERPUD1"
/gene_synonym="HERP"
/gene_synonym="KIAA0025"
/gene_synonym="Mif1"
/gene_synonym="SUP"
/db_xref="GeneID:9709"
/db_xref="HGNC:HGNC:13744"
/db_xref="MIM:608070"
CDS 90..1265
/gene="HERPUD1"
/gene_synonym="HERP"
/gene_synonym="KIAA0025"
/gene_synonym="Mif1"
/gene_synonym="SUP"
/codon_start=1
/product="homocysteine-inducible, endoplasmic reticulum
stress-inducible, ubiquitin-like domain member 1"
/protein_id="AAH08320.1"
/db_xref="GeneID:9709"
/db_xref="HGNC:HGNC:13744"
/db_xref="MIM:608070"
/translation="MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRV
YPERPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVA
ESTEEPAGSNRGQYPEDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFS
GYTPYGWLQLSWFQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQ
FPAENQPANQNAAPQVVVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSV
FLSILYFYSSLSRFLMVMGATVVMYLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNN
NLQEGTDPETEDPNHLPPDRDVLDGEQTSPSFMSTAWLVFKTFFASLLPEGPPAIAN"
BASE COUNT 478 a 446 c 451 g 489 t
ORIGIN
1 aacggtcgtt gcagagattg cgggcggctg agacgccgcc tgcctggcac ctaggagcgc
61 agcggagccc cgacaccgcc gccgccgcca tggagtccga gaccgaaccc gagcccgtca
121 cgctcctggt gaagagcccc aaccagcgcc accgcgactt ggagctgagt ggcgaccgcg
181 gctggagtgt gggccacctc aaggcccacc tgagccgcgt ctaccccgag cgtccgcgtc
241 cagaggacca gaggttaatt tattctggga agctgttgtt ggatcaccaa tgtctcaggg
301 acttgcttcc aaagcaggaa aaacggcatg ttttgcatct ggtgtgcaat gtgaagagtc
361 cttcaaaaat gccagaaatc aacgccaagg tggctgaatc cacagaggag cctgctggtt
421 ctaatcgggg acagtatcct gaggattcct caagtgatgg tttaaggcaa agggaagttc
481 ttcggaacct ttcttcccct ggatgggaaa acatctcaag gcctgaagct gcccagcagg
541 cattccaagg cctgggtcct ggtttctccg gttacacacc ctatgggtgg cttcagcttt
601 cctggttcca gcagatatat gcacgacagt actacatgca atatttagca gccactgctg
661 catcaggggc ttttgttcca ccaccaagtg cacaagagat acctgtggtc tctgcacctg
721 ctccagcccc tattcacaac cagtttccag ctgaaaacca gcctgccaat cagaatgctg
781 ctcctcaagt ggttgttaat cctggagcca atcaaaattt gcggatgaat gcacaaggtg
841 gccctattgt ggaagaagat gatgaaataa atcgagattg gttggattgg acctattcag
901 cagctacatt ttctgttttt ctcagtatcc tctacttcta ctcctccctg agcagattcc
961 tcatggtcat gggggccacc gttgttatgt acctgcatca cgttgggtgg tttccattta
1021 gaccgaggcc ggttcagaac ttcccaaatg atggtcctcc tcctgacgtt gtaaatcagg
1081 accccaacaa taacttacag gaaggcactg atcctgaaac tgaagacccc aaccacctcc
1141 ctccagacag ggatgtacta gatggcgagc agaccagccc ctcctttatg agcacagcat
1201 ggcttgtctt caagactttc tttgcctctc ttcttccaga aggcccccca gccatcgcaa
1261 actgatggtg tttgtgctgt agctgttgga ggctttgaca ggaatggact ggatcacctg
1321 actccagcta gattgcctct cctggacatg gcaatgatga gtttttaaaa aacagtgtgg
1381 atgatgatat gcttttgtga gcaagcaaaa gcagaaacgt gaagccgtga tacaaattgg
1441 tgaacaaaaa atgcccaagg cttctcatgt ctttattctg aagagcttta atatatactc
1501 tatgtagttt aataagcact gtacgtagaa ggccttaggt gttgcatgtc tatgcttgag
1561 gaacttttcc aaatgtgtgt gtctgcatgt gtgtttgtac atagaagtca tagatgcaga
1621 agtggttctg ctggtacgat ttgattcctg ttggaatgtt taaattacac taagtgtact
1681 actttatata atcaatgaaa ttgctagaca tgttttagca ggacttttct aggaaagact
1741 tatgtataat tgctttttaa aatgcagtgc tttactttaa actaagggga actttgcgga
1801 ggtgaaaacc tttgctgggt tttctgttca ataaagtttt actatgaaaa aaaaaaaaaa
1861 aaaa
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