LOCUS BC008315 2403 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH
domain 1, mRNA (cDNA clone IMAGE:3161752), partial cds.
ACCESSION BC008315
VERSION BC008315.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: i Column: 22.
FEATURES Location/Qualifiers
source 1..2403
/db_xref="H-InvDB:HIT000087030"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3161752"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2403
/gene="ARAP1"
/db_xref="GeneID:116985"
/db_xref="HGNC:HGNC:16925"
/db_xref="MIM:606646"
CDS <1..1790
/gene="ARAP1"
/codon_start=3
/product="ARAP1 protein"
/protein_id="AAH08315.1"
/db_xref="GeneID:116985"
/db_xref="HGNC:HGNC:16925"
/db_xref="MIM:606646"
/translation="IAKAFVPPLAEDLLARDFERLGRLPYKAGLSLQRAQEGWFSLSG
SELRAVFPEGPCEEPLQLRKLQELSIQGDSENQVLVLVERRRTLYIQGERRLDFMGWL
GAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRL
LESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTWLEASEIEDEEE
KVSRYRELLVRLPPVNRATVKALISHLYCVQCFSDTNQMNVHNLAIVFGPTLFQTDGQ
DYKAGRVVEDLINHYVVVFSVDEEELRKQREEITAIVKMRVAGTASGTQHAGDFICTV
YLEEKKAETEQHIKVPASMTAEELTLEILDRRNVGIREKDYWTCFEVNEREEAERPLH
FAEKVLPILHGLGTDSHLVVKKHQAMEAMLLYLASRVGDTKHGMMKFREDRSLLGLGL
PSGGFHDRYFILNSSCLRLYKEVRSHRPEKEWPIKSLKVYLGVKKKLRPPTCWGFTVV
HETEKHEKQQWYLCCDTQMELREWFATFLFVQHDGLVWPSEPSRVSRAVPEVRLGSVS
LIPLRGSENEMRRSVAAFTADPLSLLRNV"
BASE COUNT 502 a 670 c 763 g 468 t
ORIGIN
1 gtattgctaa ggcattcgtg cctcccctag ccgaggatct gctggcccgg gattttgagc
61 ggctgggacg cctaccctac aaagctggcc tgagcctaca gcgggcccag gagggctggt
121 tctctctcag tggctcggag ctccgtgctg tcttcccgga ggggccctgc gaagagccgc
181 tgcaactacg gaaactgcag gagctttcca tccaggggga cagtgagaac caggtgctgg
241 tgctggtgga gcgaaggagg acactgtaca tacagggcga gcggcggctg gacttcatgg
301 gttggctggg ggccatccag aaagcagccg ccagcatggg ggacacgctg tcggagcagc
361 agcttgggga ctcggatatc ccggtgatcg tgtaccgctg tgtggactac atcacgcagt
421 gcggcctgac ctccgagggc atctaccgca agtgtgggca gacatcgaag acacagcggc
481 tgctggagag cctgcggcag gatgcgcgct ctgtgcacct caaggagggc gagcagcacg
541 tggatgatgt ttcctcggcg ctcaagcgct tcctgcgcga cctgcctgat gggctcttca
601 ctcgcgccca gcgcctaacc tggctggagg cctcagagat tgaggacgag gaggagaagg
661 tctccaggta ccgagagctg ctggtgcggc tgccccctgt caaccgggcc acagtgaagg
721 cccttatcag ccacctgtac tgtgttcagt gcttctcaga cacgaaccag atgaacgtgc
781 acaacctggc aattgtgttt gggcccacgc tcttccagac agatgggcag gactacaagg
841 ctggccgtgt ggtggaagac ctcattaacc actatgtggt ggtgtttagt gtggatgagg
901 aagagctcag gaagcagcgg gaggagatca ctgccattgt gaagatgcgc gtggctggca
961 ctgccagtgg gacccagcat gccggtgact tcatctgcac agtgtatctg gaagagaaga
1021 aggcagagac tgagcagcat atcaaggtcc cagcatccat gactgctgag gagctcaccc
1081 tggagatcct ggatcgccgg aacgtgggca tcagggagaa ggactattgg acctgctttg
1141 aggtcaacga gagggaggag gcagagcgcc ccctgcactt tgcggagaag gtgctgccca
1201 tcctgcacgg gctgggcacg gacagccacc tggtggtgaa gaagcaccag gccatggagg
1261 ccatgctgct gtacctggcc agccgtgtcg gtgacaccaa gcatggcatg atgaagttcc
1321 gtgaggaccg cagcctcctg ggcctgggcc tgccctcagg tggcttccac gatcgctact
1381 tcatcctcaa cagcagctgc ttgcggctct acaaggaggt ccggagtcac cggcctgaga
1441 aggagtggcc tattaagagt ctcaaagtct acctgggagt gaagaagaaa ctcaggccac
1501 ccacctgctg gggcttcaca gtggtgcatg agacagagaa acatgagaag cagcagtggt
1561 acctctgctg tgacacacag atggagctcc gggagtggtt cgctaccttt ctgtttgtgc
1621 agcatgacgg cctggtgtgg ccctcagagc cctcacgcgt gtcccgggca gtgcctgagg
1681 tccggctggg tagtgtgtca ctgatccccc ttcgaggtag tgaaaatgaa atgcgccgga
1741 gtgtggctgc cttcaccgcg gaccctctgt ctcttctgcg caacgtctga gcacaggagc
1801 ccatccttgg ctctaggatt ccgccgctgg aagccttctg ttcagacacc ccttatgctc
1861 caaggcctga tgtgagccag cggggggtgc atgggaaact gcaccccaca acccacatcc
1921 tccatcctga ctgcagcatg gggttccccg gcaggggtgg gaggcagcag gggtcagcct
1981 gggcaggaac ctctcccaac tctgtccagg tgttcagacc tcttggccca acctgctcac
2041 cccaccgggt tcactgtcct tgtggggctg gagagatggg cataagtcag gaacttggga
2101 ggaccaccac cctttcagag gcgtgaggcc ctggggccct gccggaaggg agccccctgc
2161 tcctcccaac aaactccaga acagcagaaa gcgggtgctg tagaggagca ctcagctcac
2221 ggggagggag ctcttggctg agcttctaca gggctgagag ctgcgctttg gggacttcag
2281 ccttccttcc agtctgggct gagtgggggg tccagactac ctgatgcccc ttccccaatt
2341 tggggacttt ttgataatat aaatatatct gtatatttta ccctaaaaaa aaaaaaaaaa
2401 aaa
//