LOCUS BC008301 3101 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tuftelin 1, mRNA (cDNA clone MGC:15088 IMAGE:3506004),
complete cds.
ACCESSION BC008301
VERSION BC008301.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3101)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: d Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9910595.
FEATURES Location/Qualifiers
source 1..3101
/db_xref="H-InvDB:HIT000033708"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15088 IMAGE:3506004"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3101
/gene="TUFT1"
/db_xref="GeneID:7286"
/db_xref="HGNC:HGNC:12422"
/db_xref="MIM:600087"
CDS 43..1215
/gene="TUFT1"
/codon_start=1
/product="tuftelin 1"
/protein_id="AAH08301.1"
/db_xref="GeneID:7286"
/db_xref="HGNC:HGNC:12422"
/db_xref="MIM:600087"
/translation="MNGTRNWCTLVDVHPEDQAAGSVDILRLTLQGELTGDELEHIAQ
KAGRKTYAMVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQLKSE
VQYIQEARNCLQKLREDISSKLDRNLGDSLHRQEIQVVLEKPNGFSQSPTALYSSPPE
VDTCINEDVESLRKTVQDLLAKLQEAKRQHQSDCVAFEVTLSRYQREAEQSNVALQRE
EDRVEQKEAEVGELQRRLLGMETEHQALLAKVREGEVALEELRSNNADCQAEREKAAT
LEKEVAGLREKIHHLDDMLKSQQRKVRQMIEQLQNSKAVIQSKDATIQELKEKIAYLE
AENLEMHDRMEHLIEKQISHGNFSTQARAKTENPGSIRISKPPSPKPMPVIRVVET"
BASE COUNT 767 a 734 c 822 g 778 t
ORIGIN
1 ctgggtggac aagtggcgtg tgtgctgcga ccccgaggga agatgaacgg gacgcggaac
61 tggtgtaccc tggtggacgt gcacccagag gaccaggcgg cgggcagcgt ggacattctc
121 aggctgactc tccagggtga actgacagga gatgaacttg aacacatagc ccagaaggcg
181 ggcaggaaga cctatgccat ggtgtccagc cactcagctg gtcattctct ggcttcagaa
241 ctggtggagt cccatgatgg acatgaggag atcattaagg tgtacttgaa ggggaggtct
301 ggagacaaga tgattcacga gaagaatatt aaccagctga agagtgaggt ccagtacatc
361 caggaggcca ggaactgcct acagaagctc cgggaggata taagtagcaa gcttgacagg
421 aacctaggag attctctcca tcgacaggag atacaggtgg tgctagaaaa gccaaatggc
481 tttagtcaga gtcccacagc cctgtacagc agcccacctg aggtggacac ctgtataaat
541 gaggatgttg agagcttgag gaagacggtg caggacttgc tggccaagct tcaggaggcc
601 aagcggcaac accagtcaga ctgtgtggct tttgaggtca cactcagccg gtaccagagg
661 gaagcagaac aaagtaatgt ggcccttcag agagaggagg acagagtgga gcagaaagag
721 gcagaagtcg gagagctgca gaggcgcttg ctagggatgg agacggagca tcaggcctta
781 ctggcgaaag tgagggaagg ggaggtggcc ctagaggaac ttcggagcaa caatgctgac
841 tgccaagcag aacgagaaaa ggctgctacc ctggaaaagg aagtggccgg gttgcgggag
901 aagatccacc acttggatga catgctcaag agccagcagc ggaaagtccg gcaaatgata
961 gagcagctcc agaattcaaa agctgtgatc cagtcaaagg acgccaccat ccaggagctc
1021 aaggagaaaa tcgcctatct ggaggcagag aatttagaga tgcatgaccg gatggaacac
1081 ctgatagaaa aacaaatcag tcatggcaac ttcagcaccc aggcccgggc caagacagag
1141 aacccgggca gtattaggat atccaagccg cctagcccga agcccatgcc tgtcatccga
1201 gtggtggaaa cctgagctgc ctggagatgg ttgctgccat tgctgctgcc tctgcctcgg
1261 agaagcccac tgcccctgtt ggctgttaac actgcctttg acttcctgac tgtcccctgg
1321 ctgcacccag gacttcgggc tcctgtgtct caccattccc aagcccctgg ccactctaag
1381 ctgggcagac ggagcacgag cacctattca aggcactgca gccctttgga agacattgtc
1441 ctgcaagcag gagccagggc aatatctata ttcctacagt gactattttt ctctgtagag
1501 agcctccctt ctgttgtaga ctggactctg gctgcgccat aagccaggcc ttcatcagat
1561 tgggagaggt gacaagattt gcctcagccc taaaagctgg agacacagat gtccagagtg
1621 attggagaat gtcctggggg aatgaagttc cttccacaaa cacagctcag ttcttagcaa
1681 caaactgttt gtttttctac ttgctccatc tgcagcctac gctgccctgg cctcctgcag
1741 acagatagtg gggttacctg gcaaggcctg gtgagagcca gtgaacctaa gctttgactg
1801 ggtggccttg tctttctggg gaggagggaa tgtacattca gggagtagcc ttttgcggaa
1861 aaattctcta gggctacaga cagtcatgtg tgacttctct ctgctgtgaa aactcccaga
1921 gtctctttag ggattttccc taaggtgtac caccaggcac acctcagtct tcttgaccca
1981 gagcctgaaa actgttttca ctgggttcca ccagtcccag caaaatcctc tttgtattta
2041 ttttgctaag ttattggtgg ttttgcttac atctcatgat tgatataata ccaaagttct
2101 atagccttct cttgcagtat ttggatttgc ttgaaaccgg gaaaactgtt cccattaggc
2161 ttgttaatgt cagagtgaca ctattatgaa tctttctctc cctttcctct gcctgtttct
2221 tctctctttc tccttcaaac ttgctctgca gctaaggaag gtgagtctac tttccctgag
2281 gctttggggt cagagtatat gttgtttgga gaaagagggc aatcaggact cttctgggac
2341 ccagatgagt tcttcactag cccttctgaa ccccttgctc cataattggt cttttatcct
2401 ggctctgaat gaccctgcag gtcatcatgg ttttcttttt ttattgtttt tttttttttc
2461 tgagacagag tctcactctg tcacccaggc tggagtgcag tggcgcgatc tcagctcact
2521 gcaacctctg cctcccggat ttaagcgatt cttctgcctc agcctcccga gtagctggga
2581 ctacaggtgt gccaccacgc ctggctgatt tttgtatttt tagtagagat ggggtttcac
2641 catactggct aggctggtct cgaattcctg acctcaggtg atccacccac ctcggcttcc
2701 caaagtgcta ggattatagg cttgagctac tgtgcccggc ccatggtgtt tttctttagg
2761 gctcttccta cagccttgag aagtagatag gcatcagagt atggtactat aggaatcaga
2821 aaaattcaaa acaaatgtgg attaagtgtt taggctctat gtggctcacg cagccagaat
2881 ccttaagtct gtgtgtttct gtgtctcaag actgggctca cattctggct ttgtccataa
2941 caatgctctg ggatttcagg gagttccctc atttgtaaaa tgagggggtc agagcaggtg
3001 atatccatgt ttcttccctt tctgatattg ttgtctgtgg catattcttt gtatggcgaa
3061 tttaataaat tatattaatg tgtcaaaaaa aaaaaaaaaa a
//