LOCUS BC008283 769 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens cholecystokinin, mRNA (cDNA clone MGC:10571
IMAGE:3639109), complete cds.
ACCESSION BC008283
VERSION BC008283.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 769)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4755130.
FEATURES Location/Qualifiers
source 1..769
/db_xref="H-InvDB:HIT000033696"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10571 IMAGE:3639109"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..769
/gene="CCK"
/db_xref="GeneID:885"
/db_xref="MIM:118440"
CDS 128..475
/gene="CCK"
/codon_start=1
/product="CCK protein"
/protein_id="AAH08283.1"
/db_xref="GeneID:885"
/db_xref="MIM:118440"
/translation="MNSGVCLCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQL
RVSQRTDGESRAHLGALLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMD
FGRRSAEEYEYPS"
misc_feature 131..472
/gene="CCK"
/note="Gastrin; Region: Gastrin/cholecystokinin family"
/db_xref="CDD:pfam00918"
BASE COUNT 211 a 201 c 202 g 155 t
ORIGIN
1 gagaggcact ctgcaaacac ttcctcaaac tttaggaaag caaaaacatt ccttctgctc
61 aacacggcag aaaacagggt ctctgcccct tggcgctggg tgaggagttc ccaaagacca
121 gccagccatg aacagcggcg tgtgcctgtg cgtgctgatg gcggtactgg cggctggcgc
181 cctgacgcag ccggtgcctc ccgcagatcc cgcgggctcc gggctgcagc gggcagagga
241 ggcgccccgt aggcagctga gggtatcgca gagaacggat ggcgagtccc gagcgcacct
301 gggcgccctg ctggcaagat acatccagca ggcccggaaa gctccttctg gacgaatgtc
361 catcgttaag aacctgcaga acctggaccc cagccacagg ataagtgacc gggactacat
421 gggctggatg gattttggcc gtcgcagtgc cgaggagtat gagtacccct cctagaggac
481 ccagccgcca tcagcccaac gggaagcaac ctcccaaccc agaggaggca gaataagaaa
541 acaatcacac tcataactca ttgtctgtgg agtttgacat tgtatgtatc tatttattaa
601 gttctcaatg tgaaaaatgt gtctgtaaga ttgtccagtg caaccacaca cctcaccaga
661 attgtgcaaa tggaagacaa aatgttttct tcatctgtga ctcctggtct gaaaatgttg
721 ttatgctatt aaagtgattt cattctgaaa aaaaaaaaaa aaaaaaaaa
//