LOCUS BC008202 1512 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 3-oxoacyl-ACP synthase, mitochondrial, mRNA (cDNA
clone MGC:4956 IMAGE:3446492), complete cds.
ACCESSION BC008202
VERSION BC008202.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1512)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1512)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923558.
FEATURES Location/Qualifiers
source 1..1512
/db_xref="H-InvDB:HIT000033673"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4956 IMAGE:3446492"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1512
/gene="OXSM"
/gene_synonym="FLJ20604"
/gene_synonym="KS"
/db_xref="GeneID:54995"
/db_xref="HGNC:HGNC:26063"
CDS 77..1456
/gene="OXSM"
/gene_synonym="FLJ20604"
/gene_synonym="KS"
/codon_start=1
/product="3-oxoacyl-ACP synthase, mitochondrial"
/protein_id="AAH08202.1"
/db_xref="GeneID:54995"
/db_xref="HGNC:HGNC:26063"
/translation="MSNCLQNFLKITSTRLLCSRLCQQLRSKRKFFGTVPISRLHRRV
VITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFN
EQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVV
SETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGD
SFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRPFHPKRDGFVM
GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKD
AGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGA
VEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGT
NATLCIAGL"
BASE COUNT 421 a 303 c 358 g 430 t
ORIGIN
1 atcgcccccg actgtggaga agtgtccggg gtagccccgt tacaggaatg tgtttctgat
61 catctgaatc ttaatcatgt ccaactgcct gcaaaatttc ctgaaaatta caagcactcg
121 tcttctatgt tcaagattat gccaacagtt aagaagtaaa aggaagtttt tcggaactgt
181 gccaatatcc agattgcata ggcgagttgt cattacaggc attggcttag tgactcctct
241 tggtgttgga actcacctgg tttgggatcg tcttatcgga ggagagagtg gaattgtttc
301 actggttggt gaagagtata agagtatccc ttgcagtgtt gctgcttatg tgccaagagg
361 tagtgatgaa ggtcagttca atgaacaaaa ctttgtgtcc aaatcagata tcaagtccat
421 gtcttctccc accatcatgg ccattggggc tgcagaatta gccatgaagg attctggctg
481 gcatcctcag tcagaagctg atcaagtggc tactggtgtt gcaattggca tgggaatgat
541 tcctcttgaa gttgtttctg aaactgcttt gaattttcag acaaaaggtt acaataaagt
601 tagcccattt tttgtcccta agattctggt caatatggca gcaggccagg tcagcattcg
661 atataaactc aagggcccaa atcatgcagt atccacagcc tgtaccacag gagctcatgc
721 tgtgggagac tcatttagat ttatagccca tggtgatgct gatgtgatgg tggctggagg
781 tacagattct tgtattagcc ctttatctct tgctgggttt tccagagccc gggctctgag
841 cacaaactca gatcccaagt tggcatgtcg accatttcat ccaaagagag atggttttgt
901 aatgggagaa ggtgcagctg tgctggtgct ggaagaatat gaacatgctg ttcaaagaag
961 agcccggatc tatgcagaag ttttgggcta tggactctca ggtgatgctg gtcacataac
1021 tgcccctgat cctgaaggag aaggtgcctt aaggtgtatg gctgctgctt taaaagatgc
1081 aggtgtgcag cctgaggaga tatcctatat caatgcacat gctacttcca caccattggg
1141 agatgctgct gaaaacaaag ctatcaaaca tctcttcaaa gaccatgcat atgcccttgc
1201 agtttcctca actaagggag caacaggaca tctgctggga gctgcagggg cagtcgaggc
1261 agcttttacc acattagctt gttattatca aaaactacca cctactttaa acctggattg
1321 ttcggaacca gaatttgatc tcaactatgt tccactaaag gcacaggaat ggaaaactga
1381 gaaaagattt attggcctca ccaattcctt tggttttggt ggtactaatg caacactttg
1441 tattgctgga ctgtagaaca tataatttgt aattaaatac tgatttttaa atgttaaaaa
1501 aaaaaaaaaa aa
//