LOCUS BC008071 3301 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 21, mRNA (cDNA
clone MGC:2857 IMAGE:2987980), complete cds.
ACCESSION BC008071
VERSION BC008071.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3301)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3301)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008071.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: d Column: 3.
FEATURES Location/Qualifiers
source 1..3301
/db_xref="H-InvDB:HIT000033629"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2857 IMAGE:2987980"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3301
/gene="DDX21"
/gene_synonym="GUA"
/gene_synonym="GURDB"
/gene_synonym="RH-II/GU"
/gene_synonym="RH-II/GuA"
/db_xref="GeneID:9188"
/db_xref="HGNC:HGNC:2744"
/db_xref="MIM:606357"
CDS 42..2393
/gene="DDX21"
/gene_synonym="GUA"
/gene_synonym="GURDB"
/gene_synonym="RH-II/GU"
/gene_synonym="RH-II/GuA"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 21"
/protein_id="AAH08071.2"
/db_xref="GeneID:9188"
/db_xref="HGNC:HGNC:2744"
/db_xref="MIM:606357"
/translation="MPGKLRSDAGLESDTAMKKGETLRKQTEEKEKKEKPKSDKTEEI
AEEEETVFPKAKQVKKKAEPSEVDMNSPKSKKAKKKEEPSQNDISPKTKSLRKKKEPI
EKKVVSSKTKKVTKNEEPSEEEIDAPKPKKMKKEKEMNGETREKSPKLKNGFPHPEPD
CNPSEAASEESNSEIEQEIPVEQKEGAFSNFPISEETIKLLKGRGVTFLFPIQAKTFH
HVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQV
SKDFSDITKKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLK
HVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKS
TYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKE
AQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDL
VIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP
SATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGAVEALAAALAHISGATSV
DQRSLINSNVGFVTMILQCSIEMPNISYAWKELKEQLGEEIDSKVKGMVFLKGKLGVC
FDVPTASVTEIQEKWHDSRRWQLSVATEQPELEGPREGYGGFRGQREGSRGFRGQRDG
NRRFRGQREGSRGPRGQRSGGGNKSNRSQNKGQKRSFSKAFGQ"
BASE COUNT 1096 a 603 c 774 g 828 t
ORIGIN
1 cggttgagaa gaccggtcgg cctgggcaac ctgcgctgaa gatgccggga aaactccgta
61 gtgacgctgg tttggaatca gacaccgcaa tgaaaaaagg ggagacactg cgaaagcaaa
121 ccgaggagaa agagaaaaaa gagaagccaa aatctgataa gactgaagag atagcagaag
181 aggaagaaac tgttttcccc aaagctaaac aagttaaaaa gaaagcagag ccttctgaag
241 ttgacatgaa ttctcctaaa tccaaaaagg caaaaaagaa agaggagcca tctcaaaatg
301 acatttctcc taaaaccaaa agtttgagaa agaaaaagga gcccattgaa aagaaagtgg
361 tttcttctaa aaccaaaaaa gtgacaaaaa atgaggagcc ttctgaggaa gaaatagatg
421 ctcctaagcc caagaagatg aagaaagaaa aggaaatgaa tggagaaact agagagaaaa
481 gccccaaact gaagaatgga tttcctcatc ctgaaccgga ctgtaacccc agtgaagctg
541 ccagtgaaga aagtaacagt gagatagagc aggaaatacc tgtggaacaa aaagaaggcg
601 ctttctctaa ttttcccata tctgaagaaa ctattaaact tctcaaaggc cgaggagtga
661 ccttcctatt tcctatacaa gcaaagacat tccatcatgt ttacagcggg aaggacttaa
721 ttgcacaggc acggacagga actgggaaga cattctcctt tgccatccct ttgattgaga
781 aacttcatgg ggaactgcaa gacaggaaga gaggccgtgc ccctcaggta ctggttcttg
841 cacctacaag agagttggca aatcaagtaa gcaaagactt cagtgacatc acaaaaaagc
901 tgtcagtggc ttgtttttat ggtggaactc cctatggagg tcaatttgaa cgcatgagga
961 atgggattga tatcctggtt ggaacaccag gtcgtatcaa agaccacata cagaatggca
1021 aactagatct caccaaactt aagcatgttg tcctggatga agtggaccag atgttggata
1081 tgggatttgc tgatcaagtg gaagagattt taagtgtggc atacaagaaa gattctgaag
1141 acaatcccca aacattgctt ttttctgcaa cttgccctca ttgggtattt aatgttgcca
1201 agaaatacat gaaatctaca tatgaacagg tggacctgat tggtaaaaag actcagaaaa
1261 cggcaataac tgtggagcat ctggctatta agtgccactg gactcagagg gcagcagtta
1321 ttggggatgt catccgagta tatagtggtc atcaaggacg cactatcatc ttttgtgaaa
1381 ccaagaaaga agcccaggag ctgtcccaga attcagctat aaagcaggat gctcagtcct
1441 tgcatggaga cattccacag aagcaaaggg aaatcaccct gaaaggtttt agaaatggta
1501 gttttggagt tttggtggca accaatgttg ctgcacgtgg gttagacatc cctgaggttg
1561 atttggttat acaaagctct ccaccaaagg atgtagagtc ctacattcat cgatccgggc
1621 ggacaggcag agctggaagg acgggggtgt gcatctgctt ttatcagcac aaggaagaat
1681 atcagttagt acaagtggag caaaaagcgg gaattaagtt caaacgaata ggtgttcctt
1741 ctgcaacaga aataataaaa gcttccagca aagatgccat caggcttttg gattccgtgc
1801 ctcccactgc cattagtcac ttcaaacaat cagctgagaa gctgatagag gagaagggag
1861 ctgtggaagc tctggcagca gcactggccc atatttcagg tgccacgtcc gtagaccagc
1921 gctccttgat caactcaaat gtgggttttg tgaccatgat cttgcagtgc tcaattgaaa
1981 tgccaaatat tagttatgct tggaaagaac ttaaagagca gctgggcgag gagattgatt
2041 ccaaagtgaa gggaatggtt tttctcaaag gaaagctggg tgtttgcttt gatgtaccta
2101 ccgcatcagt aacagaaata caggagaaat ggcatgattc acgacgctgg cagctctctg
2161 tggccacaga gcaaccagaa ctggaaggac cacgggaagg atatggaggc ttcaggggac
2221 agcgggaagg cagtcgaggc ttcaggggac agcgggacgg aaacagaaga ttcagaggac
2281 agcgggaagg cagtagaggc ccgagaggac agcgatcagg aggtggcaac aaaagtaaca
2341 gatcccaaaa caaaggccag aagcggagtt tcagtaaagc atttggtcaa taattagaaa
2401 tagaagattt atatagcaaa aagagaatga tgtttggcaa tatagaactg aacattattt
2461 ttcatgcaaa gttaaaagca cattgtgcct ccttttgacc acttgccaag tccctgtctc
2521 tttcagacac agacaagctt catttaaatt atttcatctg atcattatca tttataactt
2581 tattgttact tcatcagttt ttccttttga aaggtgtatg aattcattac atttttattc
2641 taatgtatta tctgtagatt agaagataaa atcaagcatg tatctgccta tactttgtga
2701 gttcacctgt ctttatactc aaaagtgtcc cttaatagtg tccttccctg aaataaatac
2761 ctaagggagt gtaacagtct ctggaggacc actttgagcc tttggaagtt aaggtttcct
2821 cagccacctg ccgaacagtt tctcatgtgg tcctattatt tgtctactga gacttaatac
2881 tgagcaatgt tttgaaacaa gatttcaaac taatctgggt tgtaatacag tttataccag
2941 tgtatgctct agacttggaa gatgtagtat gtttgatgtg gattacctat acttatgttc
3001 gttttgatac atttttagct tctcattata aggtgattca tgctttagtg aattcttcat
3061 agatagtata tataaaagta cattttaata gaaagccagg gttttaagga atttcacatg
3121 tataaggtgg ctccatagct ttatttgtaa gtaggctgga taaatggtgc ttaaatggta
3181 atgtactcca cttcttccta ttggaagatt aacattattt accaagaagg acttaaggga
3241 gtaaggggcg cagattagca ttgctcaaga gtatgtaaaa aaaaaaaaaa aaaaaaaaaa
3301 a
//