LOCUS BC008042 1465 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor necrosis factor (ligand) superfamily, member 13,
mRNA (cDNA clone MGC:15176 IMAGE:3837834), complete cds.
ACCESSION BC008042
VERSION BC008042.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1465)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1465)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008042.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: p Column: 20.
FEATURES Location/Qualifiers
source 1..1465
/db_xref="H-InvDB:HIT000033609"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15176 IMAGE:3837834"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1465
/gene="TNFSF13"
/gene_synonym="APRIL"
/gene_synonym="CD256"
/gene_synonym="ligand"
/gene_synonym="TALL2"
/gene_synonym="TRDL-1"
/gene_synonym="UNQ383/PRO715"
/db_xref="GeneID:8741"
/db_xref="HGNC:HGNC:11928"
/db_xref="MIM:604472"
CDS 104..847
/gene="TNFSF13"
/gene_synonym="APRIL"
/gene_synonym="CD256"
/gene_synonym="ligand"
/gene_synonym="TALL2"
/gene_synonym="TRDL-1"
/gene_synonym="UNQ383/PRO715"
/codon_start=1
/product="tumor necrosis factor (ligand) superfamily,
member 13"
/protein_id="AAH08042.1"
/db_xref="GeneID:8741"
/db_xref="HGNC:HGNC:11928"
/db_xref="MIM:604472"
/translation="MPASSPFLLAPKGPPGNMGGPVREPALSVALWLSWGAALGAVAC
AMALLTQQTELQSLRREVSRLQGTGGPSQNGEGYPWQSLPEQSSDALEAWESGERSRK
RRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDA
GVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLFRCIRSMPSHPDRAYNSCYSAGVFH
LHQGDILSVIIPRARAKLNLSPHGTFLGL"
BASE COUNT 321 a 437 c 392 g 315 t
ORIGIN
1 caaccttctt cccttctgca ccactgcccg tacccttacc cgccccgcca cctccttgct
61 accccactct tgaaaccaca gctgttggca gggtccccag ctcatgccag cctcatctcc
121 tttcttgcta gcccccaaag ggcctccagg caacatgggg ggcccagtca gagagccggc
181 actctcagtt gccctctggt tgagttgggg ggcagctctg ggggccgtgg cttgtgccat
241 ggctctgctg acccaacaaa cagagctgca gagcctcagg agagaggtga gccggctgca
301 ggggacagga ggcccctccc agaatgggga agggtatccc tggcagagtc tcccggagca
361 gagttccgat gccctggaag cctgggagag tggggagaga tcccggaaaa ggagagcagt
421 gctcacccaa aaacagaaga agcagcactc tgtcctgcac ctggttccca ttaacgccac
481 ctccaaggat gactccgatg tgacagaggt gatgtggcaa ccagctctta ggcgtgggag
541 aggcctacag gcccaaggat atggtgtccg aatccaggat gctggagttt atctgctgta
601 tagccaggtc ctgtttcaag acgtgacttt caccatgggt caggtggtgt ctcgagaagg
661 ccaaggaagg caggagactc tattccgatg tataagaagt atgccctccc acccggaccg
721 ggcctacaac agctgctata gcgcaggtgt cttccattta caccaagggg atattctgag
781 tgtcataatt ccccgggcaa gggcgaaact taacctctct ccacatggaa ccttcctggg
841 actttgattt tacggatatc ttgcttctgt tccccatgga gctccgaatt cttgcgtgtg
901 tgtagatgag gggcggggga cgggcgccag gcattgtcca gacctggtcg gggcccactg
961 gaagcatcca gaacagcacc accatctagc ggccgctcga gggaagcacc cgccggttgg
1021 ccgaagtcca cgaagccgcc ctctgctagg gaaaacccct ggttctccat gccacacctc
1081 tctccaggtg ccctctgcct cttcacccca caagaagcct tatcctacgt ccttctctcc
1141 atctatcgga ccccagtttc catcactatc tccagagatg tagctattat gcgcccgtct
1201 acagggggtg cccgacgatg acggtgcctt cgcagtcaaa ttactcttcg ggtcccaagg
1261 tttggctttc acgcgctcca ttgccccggc gtggcaggcc attccaagcc cttccgggct
1321 ggaactggtg tcggaggagc ctcgggtgta tcgtacgccc tggtgttggt gttgcctcac
1381 tcctctgagc tcttctttct gatcaagccc tgcttaaagt taaataaaat agaatgaatg
1441 ataaaaaaaa aaaaaaaaaa aaaaa
//