LOCUS BC007986 1051 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens thymidine kinase 1, soluble, mRNA (cDNA clone MGC:3644
IMAGE:2966331), complete cds.
ACCESSION BC007986
VERSION BC007986.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1051)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1051)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC007986.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: k Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507518
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..1051
/db_xref="H-InvDB:HIT000033572"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3644 IMAGE:2966331"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1051
/gene="TK1"
/gene_synonym="TK2"
/db_xref="GeneID:7083"
/db_xref="HGNC:HGNC:11830"
/db_xref="MIM:188300"
CDS 37..741
/gene="TK1"
/gene_synonym="TK2"
/codon_start=1
/product="TK1 protein"
/protein_id="AAH07986.1"
/db_xref="GeneID:7083"
/db_xref="HGNC:HGNC:11830"
/db_xref="MIM:188300"
/translation="MSCINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQ
IAQYKCLVIKYAKDTRYSSSFCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFF
PDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREA
AYTKRLGTEKEVEVIGGADKYHSVCRLCYFKKASGQPAGPDNKENCPVPGKPGEAVAA
RKLFAPQQILQCSPAN"
BASE COUNT 238 a 298 c 310 g 205 t
ORIGIN
1 gagagtactc gggttcgtga acttcccgga ggcgcaatga gctgcattaa cctgcccact
61 gtgctgcctg gctcccccag caagacccgg gggcagatcc aggtgattct cgggccgatg
121 ttctcaggaa aaagcacaga gttgatgaga cgcgtccgtc gcttccagat tgctcagtac
181 aagtgcctgg tgatcaagta tgccaaagac actcgctaca gcagcagctt ctgcacacat
241 gaccggaaca ccatggaggc actgcccgcc tgcctgctcc gagacgtggc ccaggaggcc
301 ctgggcgtgg ctgtcatagg catcgacgag gggcagtttt tccctgacat cgtggagttc
361 tgcgaggcca tggccaacgc cgggaagacc gtaattgtgg ctgcactgga tgggaccttc
421 cagaggaagc catttggggc catcctgaac ctggtgccgc tggccgagag cgtggtgaag
481 ctgacggcgg tgtgcatgga gtgcttccgg gaagccgcct ataccaagag gctcggcaca
541 gagaaggagg tcgaggtgat tgggggagca gacaagtacc actccgtgtg tcggctctgc
601 tacttcaaga aggcctcagg ccagcctgcc gggccggaca acaaagagaa ctgcccagtg
661 ccaggaaagc caggggaagc cgtggctgcc aggaagctct ttgccccaca gcagattctg
721 caatgcagcc ctgccaactg agggacctgc gagggccgcc cgctcccttc ctgccactgc
781 cgcctactgg acgctgccct gcatgctgcc ctgaggatgg cctggattca cgccctcttg
841 tttccttttg ggctcaaagc ccttcctacc tctggtgatg gtttccacag gaacaacagc
901 atctttcacc aagatgggtg gcaccaacct tgctgggact tggatcccag gggcttatct
961 cttcaagtgt ggagagggca gggtccacgc ctctgctgta gcttatgaaa ttaactaatt
1021 gaaaattcaa aaaaaaaaaa aaaaaaaaaa a
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