LOCUS BC007985 2412 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens acyl-CoA synthetase long-chain family member 5, mRNA
(cDNA clone MGC:3494 IMAGE:2959548), complete cds.
ACCESSION BC007985
VERSION BC007985.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2412)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2412)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007985.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42794755.
FEATURES Location/Qualifiers
source 1..2412
/db_xref="H-InvDB:HIT000033571"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3494 IMAGE:2959548"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2412
/gene="ACSL5"
/gene_synonym="ACS2"
/gene_synonym="ACS5"
/db_xref="GeneID:51703"
/db_xref="HGNC:HGNC:16526"
/db_xref="MIM:605677"
CDS 91..2310
/gene="ACSL5"
/gene_synonym="ACS2"
/gene_synonym="ACS5"
/codon_start=1
/product="acyl-CoA synthetase long-chain family member 5"
/protein_id="AAH07985.2"
/db_xref="GeneID:51703"
/db_xref="HGNC:HGNC:16526"
/db_xref="MIM:605677"
/translation="MDALKPPCLWRNHERGKKDRDSCGRKNSEPGSPHSLEALRDAAP
SQGLNFLLLFTKMLFIFNFLFSPLPTPALICILTFGAAIFLWLITRPQPVLPLLDLNN
QSVGIEGGARKGVSQKNNDLTSCCFSDAKTMYEVFQRGLAVSDNGPCLGYRKPNQPYR
WLSYKQVSDRAEYLGSCLLHKGYKSSPDQFVGIFAQNRPEWIISELACYTYSMVAVPL
YDTLGPEAIVHIVNKADIAMVICDTPQKALVLIGNVEKGFTPSLKVIILMDPFDDDLK
QRGEKSGIEILSLYDAENLGKEHFRKPVPPSPEDLSVICFTSGTTGDPKGAMITHQNI
VSNAAAFLKCVEHAYEPTPDDVAISYLPLAHMFERIVQAVVYSCGARVGFFQGDIRLL
ADDMKTLKPTLFPAVPRLLNRIYDKVQNEAKTPLKKFLLKLAVSSKFKELQKGIIRHD
SFWDKLIFAKIQDSLGGRVRVIVTGAAPMSTSVMTFFRAAMGCQVYEAYGQTECTGGC
TFTLPGDWTSGHVGVPLACNYVKLEDVADMNYFTVNNEGEVCIKGTNVFKGYLKDPEK
TQEALDSDGWLHTGDIGRWLPNGTLKIIDRKKNIFKLAQGEYIAPEKIENIYNRSQPV
LQIFVHGESLRSSLVGVVVPDTDVLPSFAAKLGVKGSFEELCQNQVVREAILEDLQKI
GKESGLKTFEQVKAIFLHPEPFSIENGLLTPTLKAKRGELSKYFRTQIDSLYEHIQD"
BASE COUNT 675 a 551 c 604 g 582 t
ORIGIN
1 cgagcacgtt agaaagcctg acatggcctg actcgggaca gctcagagca gggcagaact
61 ggggacactc tgggccggcc ttctgcctgc atggacgctc tgaagccacc ctgtctctgg
121 aggaaccacg agcgagggaa gaaggacagg gactcgtgtg gcaggaagaa ctcagagccg
181 ggaagccccc attcactaga agcactgaga gatgcggccc cctcgcaggg tctgaatttc
241 ctgctgctgt tcacaaagat gctttttatc tttaactttt tgttttcccc acttccgacc
301 ccggcgttga tctgcatcct gacatttgga gctgccatct tcttgtggct gatcaccaga
361 cctcaacccg tcttacctct tcttgacctg aacaatcagt ctgtgggaat tgagggagga
421 gcacggaagg gggtttccca gaagaacaat gacctaacaa gttgctgctt ctcagatgcc
481 aagactatgt atgaggtttt ccaaagagga ctcgctgtgt ctgacaatgg gccctgcttg
541 ggatatagaa aaccaaacca gccctacaga tggctatctt acaaacaggt gtctgataga
601 gcagagtacc tgggttcctg tctcttgcat aaaggttata aatcatcacc agaccagttt
661 gtcggcatct ttgctcagaa taggccagag tggatcatct ccgaattggc ttgttacacg
721 tactctatgg tagctgtacc tctgtatgac accttgggac cagaagccat cgtacatatt
781 gtcaacaagg ctgatatcgc catggtgatc tgtgacacac cccaaaaggc attggtgctg
841 atagggaatg tagagaaagg cttcaccccg agcctgaagg tgatcatcct tatggacccc
901 tttgatgatg acctgaagca aagaggggag aagagtggaa ttgagatctt atccctatat
961 gatgctgaga acctaggcaa agagcacttc agaaaacctg tgcctcctag cccagaagac
1021 ctgagcgtca tctgcttcac cagtgggacc acaggtgacc ccaaaggagc catgataacc
1081 catcaaaata ttgtttcaaa tgctgctgcc tttctcaaat gtgtggagca tgcttatgag
1141 cccactcctg atgatgtggc catatcctac ctccctctgg ctcatatgtt tgagaggatt
1201 gtacaggctg ttgtgtacag ctgtggagcc agagttggat tcttccaagg ggatattcgg
1261 ttgctggctg acgacatgaa gactttgaag cccacattgt ttcccgcggt gcctcgactc
1321 cttaacagga tctacgataa ggtacaaaat gaggccaaga cacccttgaa gaagttcttg
1381 ttgaagctgg ctgtttccag taaattcaaa gagcttcaaa agggtatcat caggcatgat
1441 agtttctggg acaagctcat ctttgcaaag atccaggaca gcctgggcgg aagggttcgt
1501 gtaattgtca ctggagctgc ccccatgtcc acttcagtca tgacattctt ccgggcagca
1561 atgggatgtc aggtgtatga agcttatggt caaacagaat gcacaggtgg ctgtacattt
1621 acattacctg gggactggac atcaggtcac gttggggtgc ccctggcttg caattacgtg
1681 aagctggaag atgtggctga catgaactac tttacagtga ataatgaagg agaggtctgc
1741 atcaagggta caaacgtgtt caaaggatac ctgaaggacc ctgagaagac acaggaagcc
1801 ctggacagtg atggctggct tcacacagga gacattggtc gctggctccc gaatggaact
1861 ctgaagatca tcgaccgtaa aaagaacatt ttcaagctgg cccaaggaga atacattgca
1921 ccagagaaga tagaaaatat ctacaacagg agtcaaccag tgttacaaat ttttgtacac
1981 ggggagagct tacggtcatc cttagtagga gtggtggttc ctgacacaga tgtacttccc
2041 tcatttgcag ccaagcttgg ggtgaagggc tcctttgagg aactgtgcca aaaccaagtt
2101 gtaagggaag ccattttaga agacttgcag aaaattggga aagaaagtgg ccttaaaact
2161 tttgaacagg tcaaagccat ttttcttcat ccagagccat tttccattga aaatgggctc
2221 ttgacaccaa cattgaaagc aaagcgagga gagctttcca aatactttcg gacccaaatt
2281 gacagcctgt atgagcacat ccaggattag gataaggtac ttaagtacct gccggcccac
2341 tgtgcactgc ttgtgagaaa atggattaaa aactattctt acatttaaaa aaaaaaaaaa
2401 aaaaaaaaaa aa
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