LOCUS BC007949 1401 bp mRNA linear HUM 09-DEC-2003
DEFINITION Homo sapiens eukaryotic translation elongation factor 1 gamma, mRNA
(cDNA clone IMAGE:4299475), partial cds.
ACCESSION BC007949
VERSION BC007949.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1401)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1401)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007949.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: l Column: 6.
FEATURES Location/Qualifiers
source 1..1401
/db_xref="H-InvDB:HIT000033551"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4299475"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1401
/gene="EEF1G"
/gene_synonym="EF1G"
/db_xref="GeneID:1937"
/db_xref="MIM:130593"
CDS <1..1305
/gene="EEF1G"
/gene_synonym="EF1G"
/codon_start=1
/product="EEF1G protein"
/protein_id="AAH07949.2"
/db_xref="GeneID:1937"
/db_xref="MIM:130593"
/translation="GTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTP
EFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSD
IVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADIT
VVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKF
AETQPKKDTPRKEKGSREEKQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDP
FAHLPKSTFVLDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFM
SCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYE
SYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK"
misc_feature 1..234
/gene="EEF1G"
/gene_synonym="EF1G"
/note="GST_N; Region: Glutathione S-transferase,
N-terminal domain. Function: conjugation of reduced
glutathione to a variety of targets. Also included in the
alignment, but are not GSTs: * S-crystallins from squid.
Similarity to GST previously noted. * Eukaryotic
elongation factors 1-gamma. Not known to have GST
activity"
/db_xref="CDD:pfam02798"
misc_feature 256..585
/gene="EEF1G"
/gene_synonym="EF1G"
/note="GST_C; Region: Glutathione S-transferase,
C-terminal domain. Function: conjugation of reduced
glutathione to a variety of targets. Also included in the
alignment, but are not GSTs: * S-crystallins from squid.
Similarity to GST previously noted. * Eukaryotic
elongation factors 1-gamma. Not known to have GST
activity"
/db_xref="CDD:pfam00043"
misc_feature 814..1134
/gene="EEF1G"
/gene_synonym="EF1G"
/note="EF1G_domain; Region: Elongation factor 1 gamma,
conserved domain"
/db_xref="CDD:pfam00647"
BASE COUNT 348 a 364 c 385 g 304 t
ORIGIN
1 gggaccctgt acacgtatcc tgaaaactgg agggccttca aggctctcat cgctgctcag
61 tacagcgggg ctcaggtccg cgtgctctcc gcaccacccc acttccattt tggccaaacc
121 aaccgcaccc ctgaatttct ccgcaaattt cctgccggca aggtcccagc atttgagggt
181 gatgatggat tctgtgtgtt tgagagcaac gccattgcct actatgtgag caatgaggag
241 ctgcggggaa gtactccaga ggcagcagcc caggtggtgc agtgggtgag ctttgctgat
301 tccgatatag tgcccccagc cagtacctgg gtgttcccca ccttgggcat catgcaccac
361 aacaaacagg ccactgagaa tgcaaaggag gaagtgaggc gaattctggg gctgctggat
421 gcttacttga agacgaggac ttttctggtg ggcgaacgag tgacattggc tgacatcaca
481 gttgtctgca ccctgttgtg gctctataag caggttctag agccttcttt ccgccaggcc
541 tttcccaata ccaaccgctg gttcctcacc tgcattaacc agccccagtt ccgggctgtc
601 ttgggcgaag tgaaactgtg tgagaagatg gcccagtttg atgctaaaaa gtttgcagag
661 acccaaccta aaaaggacac accacggaaa gagaagggtt cacgggaaga gaagcagaag
721 ccccaggctg agcggaagga ggagaaaaag gcggctgccc ctgctcctga ggaggagatg
781 gatgaatgtg agcaggcgct ggctgctgag cccaaggcca aggacccctt cgctcacctg
841 cccaagagta cctttgtgtt ggatgaattt aagcgcaagt actccaatga ggacacactc
901 tctgtggcac tgccatattt ctgggagcac tttgataagg acggctggtc cctgtggtac
961 tcagagtatc gcttccctga agaactcact cagaccttca tgagctgcaa tctcatcact
1021 ggaatgttcc agcgactgga caagctgagg aagaatgcct tcgccagtgt catccttttt
1081 ggaaccaaca atagcagctc catttctgga gtctgggtct tccgaggcca ggagcttgcc
1141 tttccgctga gtccagattg gcaggtggac tacgagtcat acacatggcg gaaactggat
1201 cctggcagcg aggagaccca gacgctggtt cgagagtact tttcctggga gggggccttc
1261 cagcatgtgg gcaaagcctt caatcagggc aagatcttca agtgaacatc tcttgccatc
1321 acctagctgc ctgcacctgc ccttcaggga gatgggggtc attaaaggaa actgaacatt
1381 gaaaaaaaaa aaaaaaaaaa a
//