LOCUS BC007825 1440 bp mRNA linear HUM 07-AUG-2008
DEFINITION Homo sapiens galactosamine (N-acetyl)-6-sulfate sulfatase, mRNA
(cDNA clone IMAGE:2989923), partial cds.
ACCESSION BC007825
VERSION BC007825.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1440)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1440)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007825.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: a Column: 4.
FEATURES Location/Qualifiers
source 1..1440
/db_xref="H-InvDB:HIT000033471"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2989923"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1440
/gene="GALNS"
/gene_synonym="GALNAC6S"
/gene_synonym="GAS"
/gene_synonym="MPS4A"
/db_xref="GeneID:2588"
/db_xref="HGNC:HGNC:4122"
/db_xref="MIM:253000"
CDS <1..718
/gene="GALNS"
/gene_synonym="GALNAC6S"
/gene_synonym="GAS"
/gene_synonym="MPS4A"
/codon_start=2
/product="GALNS protein"
/protein_id="AAH07825.2"
/db_xref="GeneID:2588"
/db_xref="HGNC:HGNC:4122"
/db_xref="MIM:253000"
/translation="FTSDNGAALISAPEQGGSNGPFLCGKQTTFEGGMREPALAWWPG
HVTAGQVSHQLGSIMDLFTTSLALAGLTPPSDRAIDGLNLLPTLLQGRLMDRPIFYYR
GDTLMAATLGQHKAHFWTWTNSWENFRQGIDFCPGQNVSGVTTHNLEDHTKLPLIFHL
GRDPGERFPLSFASAEYQEALSRITSVVQQHQEALVPAQPQLNVCNWAVMNWAPPGCE
KLGKCLTPPESIPKKCLWSH"
BASE COUNT 318 a 445 c 386 g 291 t
ORIGIN
1 cttcacgtcg gacaacggcg ctgccctcat ttccgccccc gaacaaggtg gcagcaacgg
61 cccctttctg tgtgggaagc agaccacgtt tgaaggaggg atgagggagc ctgccctcgc
121 atggtggcca gggcacgtca ctgcaggcca ggtgagccac cagctgggca gcatcatgga
181 cctcttcacc accagcctgg cccttgcggg cctgacgccg cccagcgaca gggccattga
241 tggcctcaac ctcctcccca ccctcctgca gggccggctg atggacaggc ctatcttcta
301 ttaccgtggc gacacgctga tggcggccac cctcgggcag cacaaggctc acttctggac
361 ctggaccaac tcctgggaga acttcagaca gggcattgat ttctgccctg ggcagaacgt
421 ttcaggggtc acaactcaca atctggaaga ccacacgaag ctgcccctga tcttccacct
481 gggacgggac ccaggggaga ggttccccct cagctttgcc agcgccgagt accaggaggc
541 cctcagcagg atcacctcgg tcgtccagca gcaccaggag gccttggtcc ccgcgcagcc
601 ccagctcaac gtgtgcaact gggcggtcat gaactgggca cctccgggct gtgaaaagtt
661 agggaagtgt ctgacacctc cagaatccat tcccaagaag tgcctctggt cccactagca
721 cctgcgcaga ctcaggccag gcctagaatc tccggttggc cctgcaagtg cctggaggaa
781 ggatggctct ggcctcggtc ctcccccaac cctgcccaag ccagacagac agcacctgca
841 gacgcagggg gactgcacaa ttccacctgc ccaggacctg accctggcgt gtgcttggcc
901 ctcctcctcg cccacggcgc ctcagatttc aggaccctcc tcctcgccca cggcgcctca
961 gacctcagga ccctgccgtc tcacgccttt gtgaacccca aatatctgag accagtctca
1021 gtttattttg ccaaggttaa ggatgcacct gtgacagcct caggaggtcc tgacaacagg
1081 tgcctgaggt ggctggggat acagtttgcc tttatacatc ttagggagac acaagatcag
1141 tatgtgtatg gcgtacattg gttcagtcag ccttccactg aatacacgat tgagtctggc
1201 ccagtgaatc cgcattttta tgtaaacagt aagggaacgg ggcaatcata taagcgtttg
1261 tctcagggga gccccagagg gatgacttcc agttccgtct gtcctttgtc cacaaggaat
1321 ttccctggac gctaattatg agggaggcgt gtagcttctt atcattgtaa ctatgttatt
1381 tagaaataaa acgggaggca ggtttgccta attcccagct tgaaaaaaaa aaaaaaaaaa
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