LOCUS BC007815 1372 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens GPN-loop GTPase 2, mRNA (cDNA clone MGC:14380
IMAGE:4299794), complete cds.
ACCESSION BC007815
VERSION BC007815.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1372)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1372)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC007815.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254894.
FEATURES Location/Qualifiers
source 1..1372
/db_xref="H-InvDB:HIT000033465"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14380 IMAGE:4299794"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1372
/gene="GPN2"
/db_xref="GeneID:54707"
/db_xref="HGNC:HGNC:25513"
CDS 125..1057
/gene="GPN2"
/codon_start=1
/product="GPN-loop GTPase 2"
/protein_id="AAH07815.1"
/db_xref="GeneID:54707"
/db_xref="HGNC:HGNC:25513"
/translation="MAGAAPTTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVN
LDPANEGLPYECAVDVGELVGLGDVMDALRLGPNGGLLYCMEYLEANLDWLRAKLDPL
RGHYFLFDCPGQVELCTHHGALRSIFSQMAQWDLRLTAVHLVDSHYCTDPAKFISVLC
TSLATMLHVELPHINLLSKMDLIEHYGKLAFNLDYYTEVLDLSYLLDHLASDPFFRHY
RQLNEKLVQLIEDYSLVSFIPLNIQDKESIQRVLQAVDKANGYCFGAQEQRSLEAMMS
AAMGADFHFSSTLGIQEKYLAPSNQSVEQEAMQL"
BASE COUNT 291 a 423 c 393 g 265 t
ORIGIN
1 ggcgagtgac gctggccgcc aacgaggtat acgtactggg actctcgccc tcagtctcgt
61 ctccggcgcg gctacctgcc ccgttttccc tgtgagttga cctgctccgg gccgcgggcc
121 gccaatggca ggggccgctc cgaccacggc cttcgggcag gcggtgatcg gcccgccggg
181 ctcagggaag accacgtact gcctgggcat gagtgagttc ctgcgcgcgc tgggccggcg
241 cgtggcggtg gtgaacctgg acccggccaa cgaggggctg ccgtacgagt gtgccgtgga
301 cgtgggcgag ctggtggggc tgggcgacgt gatggacgcg ctgcgcctgg ggcccaacgg
361 cggcctgctc tactgcatgg agtacctgga agccaacctg gactggctgc gtgccaagct
421 cgaccccctc cgcggccact acttcctctt cgactgccca ggccaggtgg agctctgcac
481 gcatcacggc gccttgcgca gcatcttctc ccaaatggcg cagtgggacc tcaggctgac
541 tgccgtccac ctcgtggatt ctcactactg cacagaccct gccaagttca tttcagtact
601 gtgtacctcc ctggccacca tgctgcacgt ggaactgccc cacatcaacc tcctttccaa
661 gatggacctc attgagcatt atgggaagct ggccttcaac ctggactact acacagaggt
721 tctggacctc tcctacctgc ttgaccacct ggcttctgac cctttcttcc gccactaccg
781 ccagctcaat gagaagctag tgcagctcat cgaagactat agccttgtct cctttatccc
841 tctcaacatc caggacaagg agagcatcca gcgagtcctg caggctgtgg ataaagccaa
901 tggatactgt ttcggagccc aagagcagcg aagcttggaa gccatgatgt ctgccgcaat
961 gggagccgac ttccatttct cttccacact gggcatccag gagaagtacc tggcaccctc
1021 gaaccagtca gtggagcagg aagccatgca gctgtagcaa caaggtggac cctggagagc
1081 aggatgcata atccagcact ggggaaagtg gaggctcctg atgcaggctg cagacccaag
1141 agcaagtcct cccagccaga gctggcgggc tggcaagggg atattcagct ctgcaaagga
1201 cttctggcca aaaagccaga catggtgcca agcagaacac cccccatact gtcagtggtg
1261 tccgtgagct ctgggccctg ccaccagaaa gtcgagcact ggtcctagtc aggctgtgat
1321 gaaatgtgct acaatacaag agtttatttt ctaaaaaaaa aaaaaaaaaa aa
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