LOCUS BC007722 2318 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens glycyl-tRNA synthetase, mRNA (cDNA clone MGC:12625
IMAGE:4299853), complete cds.
ACCESSION BC007722
VERSION BC007722.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2318)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2318)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007722.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6996009.
FEATURES Location/Qualifiers
source 1..2318
/db_xref="H-InvDB:HIT000033401"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12625 IMAGE:4299853"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2318
/gene="GARS"
/gene_synonym="DSMAV"
/gene_synonym="GlyRS"
/gene_synonym="SMAD1"
/db_xref="GeneID:2617"
/db_xref="HGNC:HGNC:4162"
/db_xref="MIM:600287"
CDS 48..2267
/gene="GARS"
/gene_synonym="DSMAV"
/gene_synonym="GlyRS"
/gene_synonym="SMAD1"
/codon_start=1
/product="glycyl-tRNA synthetase"
/protein_id="AAH07722.1"
/db_xref="GeneID:2617"
/db_xref="HGNC:HGNC:4162"
/db_xref="MIM:600287"
/translation="MPSPRPVLLRGARAALLLLLPPRLLARPSLLLRRSLSAASCAPI
SLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARK
RVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNN
IIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLL
KAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV
SFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEI
SPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRL
GDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESK
TSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGKAY
KKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKDMINVKRFQKTLY
VEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQN
QEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPH
TATLRDRDSMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKKETIEE"
BASE COUNT 651 a 530 c 573 g 564 t
ORIGIN
1 gccgcttccg tcgccaccct ctctggacag cccagggccg caggctcatg ccctctccgc
61 gtccagtgct gcttagaggt gctcgcgccg ctctgctgct gctgctgccg ccccggctct
121 tagcccgacc ctcgctcctg ctccgccggt ccctcagcgc ggcctcctgc gccccgatct
181 ccttgcccgc cgccgcctcc cggagcagca tggacggcgc gggggctgag gaggtgctgg
241 cacctctgag gctagcagtg cgccagcagg gagatcttgt gcgaaaactc aaagaagata
301 aagcacccca agtagacgta gacaaagcag tggctgagct caaagcccgc aagagggttc
361 tggaagcaaa ggagctggcg ttacagccca aagatgatat tgtagaccga gcaaaaatgg
421 aagataccct gaagaggagg tttttctatg atcaagcttt tgctatttat ggaggtgtta
481 gtggtctgta tgactttggg ccagttggct gtgctttgaa gaacaatatt attcagacct
541 ggaggcagca ctttatccaa gaggaacaga tcctggagat cgattgcacc atgctcaccc
601 ctgagccagt tttaaagacc tctggccatg tagacaaatt tgctgacttc atggtgaaag
661 acgtaaaaaa tggagaatgt tttcgtgctg accatctatt aaaagctcat ttacagaaat
721 tgatgtctga taagaagtgt tctgtcgaaa agaaatcaga aatggaaagt gttttggccc
781 agcttgataa ctatggacag caagaacttg cggatctttt tgtgaactat aatgtaaaat
841 ctcccattac tggaaatgat ctatcccctc cagtgtcttt taacttaatg ttcaagactt
901 tcattgggcc tggaggaaac atgcctgggt acttgagacc agaaactgca caggggattt
961 tcttgaattt caaacgactt ttggagttca accaaggaaa gttgcctttt gctgctgccc
1021 agattggaaa ttcttttaga aatgagatct cccctcgatc tggactgatc agagtcagag
1081 aattcacaat ggcagaaatt gagcactttg tagatcccag tgagaaagac caccccaagt
1141 tccagaatgt ggcagacctt cacctttatt tgtattcagc aaaagcccag gtcagcggac
1201 agtccgctcg gaaaatgcgc ctgggagatg ctgttgaaca gggtgtgatt aataacacag
1261 tattaggcta tttcattggc cgcatctacc tctacctcac gaaggttgga atatctccag
1321 ataaactccg cttccggcag cacatggaga atgagatggc ccattatgcc tgtgactgtt
1381 gggatgcaga atccaaaaca tcctacggtt ggattgagat tgttggatgt gctgatcgtt
1441 cctgttatga cctctcctgt catgcacgag ccaccaaagt cccacttgta gctgagaaac
1501 ctctgaaaga acccaaaaca gtcaatgttg ttcagtttga acccagtaag ggagcaattg
1561 gtaaggcata taagaaggat gcaaaactgg tgatggagta tcttgccatt tgtgatgagt
1621 gctacattac agaaatggag atgctgctga atgagaaagg ggaattcaca attgaaactg
1681 aagggaaaac atttcagtta acaaaagaca tgatcaatgt gaagagattc cagaaaacac
1741 tatatgtgga agaagttgtt ccgaatgtaa ttgaaccttc cttcggcctg ggtaggatca
1801 tgtatacggt atttgaacat acattccatg tacgagaagg agatgaacag agaacattct
1861 tcagtttccc tgctgtagtt gctccattca aatgttccgt cctcccactg agccaaaacc
1921 aggagttcat gccatttgtc aaggaattat cggaagccct gaccaggcat ggagtatctc
1981 acaaagtaga cgattcctct gggtcaatcg gaaggcgcta tgccaggact gatgagattg
2041 gcgtggcttt tggtgtcacc attgactttg acacagtgaa caagaccccc cacactgcaa
2101 ctctgaggga ccgtgactca atgcggcaga taagagcaga gatctctgag ctgcccagca
2161 tagtccaaga cctagccaat ggcaacatca catgggctga tgtggaggcc aggtatcctc
2221 tgtttgaagg gcaagagact ggtaaaaaag agacaatcga ggaatgagga caattttgac
2281 aacttttgac cacttgcgct aaaaaaaaaa aaaaaaaa
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