LOCUS BC007686 2055 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens calpain 2, (m/II) large subunit, mRNA (cDNA clone
IMAGE:3637421), partial cds.
ACCESSION BC007686
VERSION BC007686.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2055)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2055)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007686.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: j Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12408645.
FEATURES Location/Qualifiers
source 1..2055
/db_xref="H-InvDB:HIT000086885"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3637421"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2055
/gene="CAPN2"
/gene_synonym="CANPL2"
/gene_synonym="CANPml"
/gene_synonym="mCANP"
/db_xref="GeneID:824"
/db_xref="HGNC:HGNC:1479"
/db_xref="MIM:114230"
CDS 225..>2055
/gene="CAPN2"
/gene_synonym="CANPL2"
/gene_synonym="CANPml"
/gene_synonym="mCANP"
/codon_start=1
/product="CAPN2 protein"
/protein_id="AAH07686.1"
/db_xref="GeneID:824"
/db_xref="HGNC:HGNC:1479"
/db_xref="MIM:114230"
/translation="MAGIAAKLAKDREAAEGLGSHERAIKYLNQDYEALRNECLEAGT
LFQDPSFPAIPSALGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGATRTDICQGAL
GDCWLLAAIASLTLNEEILARVVPLNQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPT
KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELK
KPPPNLFKIIQKALQKGSLLGCSIDITSAADSEAITFQKLVKGHAYSVTGAEEVESNG
SLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRH
YSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLE
EEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELSGQTNIHLSK
NFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVFSEKKAD
YQAVDDEIEANLEEFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQD
IKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKKKKK"
BASE COUNT 493 a 573 c 635 g 354 t
ORIGIN
1 caggccgcag gatggcctgg tcccgggccg ggagcccagc aggccgggag cggctgaggc
61 cacaccccgc gggccgggcc gcttccctcc ggtgaatcat cgctcgcagc ggcggcgccc
121 gcagtggccg cagcagcgcg ccgggccctg gccgcgcccc agccgagcgc agcgcggagt
181 cgccccgacc tttctctgcg cagtacggcc gccgggaccg cagcatggcg ggcatcgcgg
241 ccaagctggc gaaggaccgg gaggcggccg aggggctggg ctcccacgag agggccatca
301 agtacctcaa ccaggactac gaggcgctgc ggaacgagtg cctggaggcc gggacgctct
361 tccaggaccc gtccttcccg gccatcccct cggccctggg cttcaaggag ttggggccct
421 actccagcaa aacccggggc atcgagtgga agcgccccac ggagatctgc gctgaccccc
481 agtttatcat tggaggagcc acccgcacag acatctgcca aggagccctg ggtgactgct
541 ggctgctggc agccattgcc tccctcacct tgaatgaaga aatcctggct cgagtcgtcc
601 ccctaaacca gagcttccag gaaaactatg cagggatctt tcacttccag ttctggcaat
661 acggcgagtg ggtggaggtg gtggtggatg acaggctgcc caccaaggac ggggagctgc
721 tctttgtgca ttcagccgaa gggagcgagt tctggagcgc cctgctggag aaggcatacg
781 ccaagatcaa cggatgctat gaagcactat cagggggtgc caccactgag ggcttcgaag
841 acttcaccgg aggcattgct gagtggtatg agttgaagaa gccccctccc aacctgttca
901 agatcatcca gaaagctctg caaaaaggct ctctccttgg ctgctccatc gacatcacca
961 gcgccgcgga ctcggaggcc atcacgtttc agaagctggt gaaggggcac gcgtactcgg
1021 tcaccggagc cgaggaggtt gaaagtaacg gaagcctaca gaaactgatc cgcatccgaa
1081 atccctgggg agaagtggag tggacagggc ggtggaatga caactgccca agctggaaca
1141 ctatagaccc agaggagagg gaaaggctga ccagacggca tgaagatgga gaattctgga
1201 tgtctttcag tgacttcctg aggcactatt cccgcctgga gatctgtaac ctgaccccag
1261 acactctcac cagcgatacc tacaagaagt ggaaactcac caaaatggat gggaactgga
1321 ggcggggctc caccgcggga ggttgcagga actacccgaa cacattctgg atgaaccctc
1381 agtacctgat caagctggag gaggaggatg aggacgagga ggatggggag agcggctgca
1441 ccttcctggt ggggctcatt cagaagcacc gacggcggca gaggaagatg ggcgaggaca
1501 tgcacaccat cggctttggc atctatgagg ttccagagga gttaagtggg cagaccaaca
1561 tccacctcag caaaaacttc ttcctgacga atcgcgccag ggagcgctca gacaccttca
1621 tcaacctccg ggaggtgctc aaccgcttca agctgccgcc aggagagtac attctcgtgc
1681 cttccacctt cgaacccaac aaggatgggg atttctgcat ccgggtcttt tctgaaaaga
1741 aagctgacta ccaagctgtc gatgatgaaa tcgaggccaa tcttgaagag ttcgacatca
1801 gcgaggatga cattgatgat ggattcagga gactgtttgc ccagttggca ggagaggatg
1861 cggagatctc tgcctttgag ctgcagacca tcctgagaag ggttctagca aagcgccaag
1921 atatcaagtc agatggcttc agcatcgaga catgcaaaat tatggttgac atgctagatt
1981 cggacgggag tggcaagctg gggctgaagg agttctacat tctctggacg aagattcaaa
2041 aaaaaaaaaa aaaaa
//