LOCUS BC007682 1933 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens STAM binding protein, mRNA (cDNA clone MGC:3546
IMAGE:3619837), complete cds.
ACCESSION BC007682
VERSION BC007682.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1933)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1933)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 12 Row: l Column: 19.
FEATURES Location/Qualifiers
source 1..1933
/db_xref="H-InvDB:HIT000033378"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3546 IMAGE:3619837"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1933
/gene="STAMBP"
/gene_synonym="AMSH"
/db_xref="GeneID:10617"
/db_xref="HGNC:HGNC:16950"
/db_xref="MIM:606247"
CDS 17..1291
/gene="STAMBP"
/gene_synonym="AMSH"
/codon_start=1
/product="STAM binding protein"
/protein_id="AAH07682.1"
/db_xref="GeneID:10617"
/db_xref="HGNC:HGNC:16950"
/db_xref="MIM:606247"
/translation="MSDHGDVSLPPEDRVRALSQLGSAVEVNEDIPPRRYFRSGVEII
RMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPK
AEELKAELLKRYTKEYTEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQE
QFHAFEEMIRNQELEKERLKIVQEFGKVDPGLGGPLVPDLEKPSLDVFPTLTVSSIQP
SDCHTTVRPAKPPVVDRSLKPGALSNSESIPTIDGLRHVVVPGRLCPQFLQLASANTA
RGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQGLITLGWI
HTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSPKFQETGFFKLTDHGLEEISSCRQ
KGFHPHSKDPPLFCSCSHVTVVDRAVTITDLR"
BASE COUNT 600 a 425 c 422 g 486 t
ORIGIN
1 aaagaacttg gtcctgatgt ctgaccacgg agatgtgagc ctcccgcccg aagaccgggt
61 gagggctctc tcccagctgg gtagtgcggt agaggtgaat gaagacattc caccccgtcg
121 gtacttccgc tctggagttg agattatccg aatggcatcc atttactctg aggaaggcaa
181 cattgaacat gccttcatcc tctataacaa gtatatcacg ctctttattg agaaactacc
241 aaaacatcga gattacaaat ctgctgtcat tcctgaaaag aaagacacag taaagaaatt
301 aaaggagatt gcatttccca aagcagaaga gctgaaggca gagctgttaa aacgatatac
361 caaagaatat acagaatata atgaagaaaa gaagaaggaa gcagaggaat tggcccggaa
421 catggccatc cagcaagagc tggaaaagga aaaacagagg gtagcacaac agaagcagca
481 gcaattggaa caggaacagt tccatgcctt cgaggagatg atccggaacc aggagctaga
541 aaaagagcga ctgaaaattg tacaggagtt tgggaaggta gaccctggcc taggtggccc
601 gctagtgcct gacttggaga agccctcctt agatgtgttc cccaccttaa cagtctcatc
661 catacagcct tcagactgtc acacaactgt aaggccagct aagccacctg tggtggacag
721 gtccttgaaa cctggagcac tgagcaactc agaaagtatt cccacaatcg atggattgcg
781 ccatgtggtg gtgcctgggc ggctgtgccc acagtttctc cagttagcca gtgccaacac
841 tgcccgggga gtggagacat gtggaattct ctgtggaaaa ctgatgagga atgaatttac
901 cattacccat gttctcatcc ccaagcaaag tgctgggtct gattactgca acacagagaa
961 cgaagaagaa cttttcctca tacaggatca gcagggcctc atcacactgg gctggattca
1021 tactcacccc acacagaccg cgtttctctc cagtgtcgac ctacacactc actgctctta
1081 ccagatgatg ttgccagagt cagtagccat tgtttgctcc cccaagttcc aggaaactgg
1141 attctttaaa ctaactgacc atggactaga ggagatttct tcctgtcgcc agaaaggatt
1201 tcatccacac agcaaggatc cacctctgtt ctgtagctgc agccacgtga ctgttgtgga
1261 cagagcagtg accatcacag accttcgatg agcgtttgag tccaacacct tccaagaaca
1321 acaaaaccat atcagtgtac tgtagcccct taatttaagc tttctagaaa gctttggaag
1381 tttttgtaga tagtagaaag gggggcatca cctgagaaag agctgatttt gtatttcagg
1441 tttgaaaaga aataactgaa catatttttt aggcaagtca gaaagagaac atggtcaccc
1501 aaaagcaact gtaactcaga aattaagtta ctcagaaatt aagtagctca gaaattaaga
1561 aagaatggta taatgaaccc ccatataccc ttccttctgg attcaccaat tgttaacatt
1621 tttttcctct cagctatcct tctaatttct ctctaatttc aatttgttta tatttacctc
1681 tgggctcaat aagggcatct gtgcagaaat ttggaagcca tttagaaaat cttttggatt
1741 ttcctgtggt ttatggcaat atgaatggag cttattactg gggtgaggga cagcttactc
1801 catttgacca gattgtttgg ctaacacatc ccgaagaatg attttgtcag gaattattgt
1861 tatttaataa atatttcagg atatttttcc tctacaataa agtaacaatt aacttaaaaa
1921 aaaaaaaaaa aaa
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