LOCUS BC007642 1802 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens centromere protein T, mRNA (cDNA clone IMAGE:3534358),
partial cds.
ACCESSION BC007642
VERSION BC007642.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1802)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: i Column: 17.
FEATURES Location/Qualifiers
source 1..1802
/db_xref="H-InvDB:HIT000086873"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3534358"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1802
/gene="CENPT"
/gene_synonym="CENP-T"
/gene_synonym="FLJ13111"
/db_xref="GeneID:80152"
/db_xref="HGNC:HGNC:25787"
CDS <1..1678
/gene="CENPT"
/gene_synonym="CENP-T"
/gene_synonym="FLJ13111"
/codon_start=2
/product="CENPT protein"
/protein_id="AAH07642.1"
/db_xref="GeneID:80152"
/db_xref="HGNC:HGNC:25787"
/translation="HNPDSDSTPRTLLRRVLDTADPRTPRRPRSARAGARRALLETAS
PRKLSGQTRTIARGRSHGARSVGRSAHIQASGHLEEQTPRTLLKNILLTAPESSILMP
ESVVKPVPAPQAVQPSRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQRLRLSVFQ
QGVDQGLSLSQEPQGNADASSLTRSLNLTFATPLQPQSVQRPGLARRPPARRAVDVGA
FLRDLRDTSLAPPNIVLEDTQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKTQS
SGPGLQKNSPGKPAQFLAGEAEEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKM
EEEGVSVSEMEATGAQGPSRVEEAEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRA
ASPESASSTPESLQARRHHQFLEPAPAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQ
DPHKAGLSHYVKLFSFYAKMPMERKALEMVEKCLDKYFQHLCDDLEVFAAHAGRKTVK
PEDLELLMRRQGLVTDQVSLHVLVERHLPLEYRQLLIPCAYSGNSVFPAQ"
BASE COUNT 407 a 546 c 520 g 329 t
ORIGIN
1 ccacaaccct gacagcgact ccacgccgcg cacgctgctg cgacgcgtgc tggatacagc
61 ggacccgcgc accccgcggc gaccccggag tgctcgggct ggagcccgga gagccctgct
121 tgaaacggct tcccccagga agttgagtgg ccaaacaagg acgatagcca gagggcgttc
181 ccatggagcc aggtctgttg gcagatcggc ccatattcag gccagtgggc acttggagga
241 acagacacct cggacgctgc tgaagaacat cctactaact gccccagaat cttccatcct
301 gatgcctgag tcggtagtga agccagtgcc agcaccgcag gcggtccaac cctccagaca
361 agagagcagt tgcggcagcc tggagctgca acttcctgag ctcgagcccc ccacaaccct
421 ggctccaggt ctgctggccc ctggcaggag gaaacagagg ctgagactgt cagtgtttca
481 gcagggagtg gaccaggggc tgtctctctc ccaagagcct caagggaatg ctgatgcctc
541 ttccctcacc agatccctca acctgacctt tgccacacct cttcagccac agtcagtgca
601 gaggcctggc ttggcccgca gacctccagc ccgccgagct gtagacgtgg gtgccttttt
661 gcgggatctg cgagatactt ccctggctcc tccaaacatt gtgttggagg acacccagcc
721 gttctctcag cccatggttg gctcccccaa cgtgtatcac tccctgccct gcacgcctca
781 cactggggct gaagacgctg agcaggctgc cggtcgcaag acacagagca gtgggcctgg
841 gctgcagaag aatagccctg ggaaaccagc ccagtttctg gcaggagagg cagaggaggt
901 caatgccttt gctctgggct tcctgagcac cagcagtggt gtctctggag aagatgaagt
961 agagccctta cacgatggag ttgaagaggc agagaaaaag atggaagaag aaggtgtgag
1021 tgtgagtgaa atggaggcaa caggagcaca aggacccagc agggtagaag aggctgaggg
1081 acacacagag gtgacagaag cagagggatc ccaggggact gctgaggctg acgggccagg
1141 agcatcttca ggggatgagg atgcctctgg cagggcagca agtccagagt cggcctccag
1201 cacccctgag tctctccagg ccaggcgaca tcatcagttt cttgagccag ccccagcgcc
1261 tggtgctgca gtcttatctt cagagcctgc agagcctctg ttggtcaggc atccccctag
1321 gccccggacc accggcccca ggccccggca agatccccac aaggctggac tgagccacta
1381 tgtgaaactc tttagcttct atgccaagat gcccatggag aggaaggctc ttgagatggt
1441 ggagaagtgc ctagataaat atttccagca tctttgtgat gatctggagg tatttgctgc
1501 tcatgctggc cgcaagactg tgaagccaga ggacctggag ctgctgatgc ggcggcaggg
1561 cctggtcact gaccaagtct cactgcacgt gctagtggag cggcacctgc ccctggagta
1621 ccggcagctg ctcatcccct gtgcatacag tggcaactct gtcttccctg cccagtagtg
1681 gccaggcttc aacactttcc ctgtccccac ctggggactc ttgcccccac atatttctcc
1741 aggtctcctc cccacccccc cagcatcaat aaagtgtcat aaacaaaaaa aaaaaaaaaa
1801 aa
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