LOCUS BC007612 2775 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens prosaposin, mRNA (cDNA clone MGC:15695 IMAGE:3351606),
complete cds.
ACCESSION BC007612
VERSION BC007612.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2775)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2775)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: n Column: 2.
FEATURES Location/Qualifiers
source 1..2775
/db_xref="H-InvDB:HIT000033332"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15695 IMAGE:3351606"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2775
/gene="PSAP"
/db_xref="GeneID:5660"
/db_xref="HGNC:HGNC:9498"
/db_xref="MIM:176801"
CDS 19..1593
/gene="PSAP"
/codon_start=1
/product="prosaposin"
/protein_id="AAH07612.1"
/db_xref="GeneID:5660"
/db_xref="HGNC:HGNC:9498"
/db_xref="MIM:176801"
/translation="MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGA
VKHCLQTVWNKPTVKSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNM
SASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIP
ELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTF
VQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMMHMQPKEICALVGFCDEVKE
MPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKT
EKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR
LPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ
CDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTET
AAQCNAVEHCKRHVWN"
BASE COUNT 628 a 695 c 785 g 667 t
ORIGIN
1 gcggagtcag acggtgctat gtacgccctc ttcctcctgg ccagcctcct gggcgcggct
61 ctagccggcc cggtccttgg actgaaagaa tgcaccaggg gctcggcagt gtggtgccag
121 aatgtgaaga cggcgtccga ctgcggggca gtgaagcact gcctgcagac cgtttggaac
181 aagccaacag tgaaatccct tccctgcgac atatgcaaag acgttgtcac cgcagctggt
241 gatatgctga aggacaatgc cactgaggag gagatccttg tttacttgga gaagacctgt
301 gactggcttc cgaaaccgaa catgtctgct tcatgcaagg agatagtgga ctcctacctc
361 cctgtcatcc tggacatcat taaaggagaa atgagccgtc ctggggaggt gtgctctgct
421 ctcaacctct gcgagtctct ccagaagcac ctagcagagc tgaatcacca gaagcagctg
481 gagtccaata agatcccaga gctggacatg actgaggtgg tggccccctt catggccaac
541 atccctctcc tcctctaccc tcaggacggc ccccgcagca agccccagcc aaaggataat
601 ggggacgttt gccaggactg cattcagatg gtgactgaca tccagactgc tgtacggacc
661 aactccacct ttgtccaggc cttggtggaa catgtcaagg aggagtgtga ccgcctgggc
721 cctggcatgg ccgacatatg caagaactat atcagccagt attctgaaat tgctatccag
781 atgatgatgc acatgcaacc caaggagatc tgtgcgctgg ttgggttctg tgatgaggtg
841 aaagagatgc ccatgcagac tctggtcccc gccaaagtgg cctccaagaa tgtcatccct
901 gccctggaac tggtggagcc cattaagaag cacgaggtcc cagcaaagtc tgatgtttac
961 tgtgaggtgt gtgaattcct ggtgaaggag gtgaccaagc tgattgacaa caacaagact
1021 gagaaagaaa tactcgacgc ttttgacaaa atgtgctcga agctgccgaa gtccctgtcg
1081 gaagagtgcc aggaggtggt ggacacgtac ggcagctcca tcctgtccat cctgctggag
1141 gaggtcagcc ctgagctggt gtgcagcatg ctgcacctct gctctggcac gcggctgcct
1201 gcactgaccg ttcacgtgac tcagccaaag gacggtggct tctgcgaagt gtgcaagaag
1261 ctggtgggtt atttggatcg caacctggag aaaaacagca ccaagcagga gatcctggct
1321 gctcttgaga aaggctgcag cttcctgcca gacccttacc agaagcagtg tgatcagttt
1381 gtggcagagt acgagcccgt gctgatcgag atcctggtgg aggtgatgga tccttccttc
1441 gtgtgcttga aaattggagc ctgcccctcg gcccataagc ccttgttggg aactgagaag
1501 tgtatatggg gcccaagcta ctggtgccag aacacagaga cagcagccca gtgcaatgct
1561 gtcgagcatt gcaaacgcca tgtgtggaac taggaggagg aatattccat cttggcagaa
1621 accacagcat tggttttttt ctacttgtgt gtctggggga atgaacgcac agatctgttt
1681 gactttgtta taaaaatagg gctcccccac ctcccccatt tctgtgtcct ttattgtagc
1741 attgctgtct gcaagggagc ccctagcccc tggcagacat agctgcttca gtgccccttt
1801 tctctctgct agatggatgt tgatgcactg gaggtctttt agcctgccct tgcatggcgc
1861 ctgctggagg aggagagagc tctgctggca tgagccacag tttcttgact ggaggccatc
1921 aaccctcttg gttgaggcct tgttctgagc cctgacatgt gcttgggcac tggtgggcct
1981 gggcttctga ggtggcctcc tgccctgatc agggaccctc cccgctttcc tgggcctctc
2041 agttgaacaa agcagcaaaa caaaggcagt tttatatgaa agattagaag cctggaataa
2101 tcaggctttt taaatgatgt aattcccact gtaatagcat agggattttg gaagcagctg
2161 ctggtggctt gggacatcag tggggccaag ggttctctgt ccctggttca actgtgattt
2221 ggctttcccg tgtctttcct ggtgatgcct tgtttggggt tctgtgggtt tgggtgggaa
2281 gagggccatc tgcctgaatg taacctgcta gctctccgaa ggccctgcgg gcctggcttg
2341 tgtgagcgtg tggacagtgg tggccgcgct gtgcctgctc gtgttgccta catgtccctg
2401 gctgttgagg cgctgcttca gcctgcaccc ctcccttgtc tcatagatgc tccttttgac
2461 cttttcaaat aaatatggat ggcaagctcc taggcctctg gcttcctggt agagggcggc
2521 atgccgaagg gtctgctggg tgtggattgg atgctggggt gtgggggttg gaagctgtct
2581 gtggcccact tgggcaccca cgcttctgtc cacttctggt tgccaggaga cagcaagcaa
2641 agccagcagg acatgaagtt gctattaaat ggacttcgtg atttttgttt tgcactaaag
2701 tttctgtgat ttaacaataa aattctgtta gccagaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaa
//