LOCUS BC007546 1738 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens aminomethyltransferase, mRNA (cDNA clone
IMAGE:2959737), partial cds.
ACCESSION BC007546
VERSION BC007546.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1738)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1738)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: b Column: 9.
FEATURES Location/Qualifiers
source 1..1738
/db_xref="H-InvDB:HIT000033290"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2959737"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1738
/gene="AMT"
/gene_synonym="GCE"
/gene_synonym="GCST"
/gene_synonym="NKH"
/db_xref="GeneID:275"
/db_xref="HGNC:HGNC:473"
/db_xref="MIM:238310"
CDS <1..1153
/gene="AMT"
/gene_synonym="GCE"
/gene_synonym="GCST"
/gene_synonym="NKH"
/codon_start=2
/product="AMT protein"
/protein_id="AAH07546.2"
/db_xref="GeneID:275"
/db_xref="HGNC:HGNC:473"
/db_xref="MIM:238310"
/translation="AVSVVARLGFRLQAFPPALCRPLSCAQEVLRRTPLYDFHLAHGG
KMVAFAGWSLPVQYRDSHTDSHLHTRQHCSLFDVSHMLQTKILGSDRVKLMESLVVGD
IAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALMQDKVREL
QNQGRDVGLEVLDNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVSGCRVT
RCGYTGEDGVEISVPVAGAVHLATAILKNPEVKLAGLAARDSLRLEAGLCLYGNDIDE
HTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPIL
NMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVELPSGPCF"
BASE COUNT 380 a 451 c 510 g 397 t
ORIGIN
1 ggctgtaagt gtggtggccc gtctgggctt tcgcctgcag gcattccccc cggccttgtg
61 tcgtccactt agttgcgcac aggaggtgct ccgcaggaca ccgctctatg acttccacct
121 ggcccacggc gggaaaatgg tggcgtttgc gggttggagt ctgccagtgc agtaccggga
181 cagtcacact gactcgcacc tgcacacacg ccagcactgc tcgctctttg acgtgtctca
241 tatgctgcag accaagatac ttggtagtga ccgggtgaag ctgatggaga gtctagtggt
301 tggagacatt gcagagctaa gaccaaacca ggggacactg tcgctgttta ccaacgaggc
361 tggaggcatc ttagatgact tgattgtaac caatacttct gagggccacc tgtatgtggt
421 gtccaacgct ggctgctggg agaaagattt ggccctcatg caggacaagg tcagggagct
481 tcagaaccag ggcagagatg tgggcctgga ggtgttggat aatgccctgc tagctctgca
541 aggccccact gcagcccagg tactacaggc cggcgtggca gatgacctga ggaaactgcc
601 cttcatgacc agtgctgtga tggaggtgtt tggcgtgtct ggctgccgcg tgacccgctg
661 tggctacaca ggagaggatg gtgtggagat ctcggtgccg gtagcggggg cagttcacct
721 ggcaacagct attctgaaaa acccagaggt gaagctggca gggctggcag ccagggacag
781 cctgcgcctg gaggcaggcc tctgcctgta tgggaatgac attgatgaac acactacacc
841 tgtggagggc agcctcagtt ggacactggg gaagcgccgc cgagctgcta tggacttccc
901 tggagccaag gtcattgttc cccagctgaa gggcagggtg cagcggaggc gtgtggggtt
961 gatgtgtgag ggggccccca tgcgggcaca cagtcccatc ctgaacatgg agggtaccaa
1021 gattggtact gtgactagtg gctgcccctc cccctctctg aagaagaatg tggcgatggg
1081 ttatgtgccc tgcgagtaca gtcgtccagg gacaatgctg ctggtagagc ttccttcagg
1141 accctgcttc tgagtgacgg accagctcac acaatgtctt gtttcagtcc atgatcccac
1201 tgacctactc ttgcctgctg gagggtaatg agaagctttg gttctgccat ctctcccact
1261 ctgccaggtg ctggctgtgg agcaaaggct cacctttgtg gagaggataa aacctgccca
1321 acctacctca ccatggtttt tcacattgca aagggtaata acatgggcag tgcggactta
1381 ggctaccccc tccagtttgc tttccgtaaa tgcaaattgt ccttactgca agtcaggaat
1441 gattgctgac tcacagtagg gctgctatgc ctgtgtgtaa acttggggat ggctgaggga
1501 acatagactc actcttccac attcccaagt tggtctagtg tgctgcccag tagcaaacca
1561 tggcagactc accacctatt ctgagttcca gggctgctgt agggcagggt gggcttcctc
1621 ccagacttgc cttaccctgg gctgatcttt gcccctggta tgcattaatg gactccactg
1681 aatcctgaaa aaaaaattaa acttccttct tacttgccaa aaaaaaaaaa aaaaaaaa
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