LOCUS BC007537 3285 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CSRP2 binding protein, mRNA (cDNA clone MGC:15388
IMAGE:3350378), complete cds.
ACCESSION BC007537
VERSION BC007537.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3285)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3285)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29570789.
FEATURES Location/Qualifiers
source 1..3285
/db_xref="H-InvDB:HIT000033285"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15388 IMAGE:3350378"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3285
/gene="CSRP2BP"
/gene_synonym="CRP2BP"
/gene_synonym="dJ717M23.1"
/gene_synonym="MGC15388"
/gene_synonym="PRO1194"
/db_xref="GeneID:57325"
/db_xref="HGNC:HGNC:15904"
CDS 342..2690
/gene="CSRP2BP"
/gene_synonym="CRP2BP"
/gene_synonym="dJ717M23.1"
/gene_synonym="MGC15388"
/gene_synonym="PRO1194"
/codon_start=1
/product="CSRP2 binding protein"
/protein_id="AAH07537.1"
/db_xref="GeneID:57325"
/db_xref="HGNC:HGNC:15904"
/translation="MDSSIHLSSLISRHDDEATRTSTSEGLEEGEVEGETLLIVESED
QASVDLSHDQSGDSLNSDEGDVSWMEEQLSYFCDKCQKWIPASQLREQLSYLKGDNFF
RFTCSDCSADGKEQYERLKLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHW
TFLLGNRKKTSTWWSTVAGCLSVGSPMYFRSGAQEFGEPGWWKLVHNKPPTMKPEGEK
LSASTLKIKAASKPTLDPIITVEGLRKRASRNPVESAMELKEKRSRTQEAKDIRRAQK
EAAGFLDRSTSSTPVKFISRGRRPDVILEKGEVIDFSSLSSSDRTPLTSPSPSPSLDF
SAPGTPASHSATPSLLSEADLIPDVMPPQALFHDDDEMEGDGVIDPGMEYVPPPAGSV
ASGPVVGGRKKVRGPEQIKQEVESEEEKPDRMDIDSEDTDSNTSLQTRAREKRKPQLE
KDTKPKEPRYTPVSIYEEKLLLKRLEACPGAVAMTPEARRLKRKLIVRQAKRDRGLPL
FDLDQVVNAALLLVDGIYGAKEGGISRLPAGQATYRTTCQDFRILDRYQTSLPSRKGF
RHQTTKFLYRLVGSEDMAVDQSIVSPYTSRILKPYIRRDYETKPPKLQLLSQIRSHLH
RSDPHWTPEPDAPLDYCYVRPNHIPTINSMCQEFFWPGIDLSECLQYPDFSVVVLYKK
VIIAFGFMVPDVKYNEAYISFLFVHPEWRRAGIATFMIYHLIQTCMGKDVTLHVSASN
PAMLLYQKFGFKTEEYVLDFYDKYYPLESTECKHAFFLRLRR"
BASE COUNT 928 a 702 c 829 g 826 t
ORIGIN
1 agaagatgtt attggcaaaa ggatctcaaa aatcatgact tgaatgtgaa atatctgttg
61 gacagacaac acgagtttgt gtgtgtgtgt tgatggagag tagcttagta gtatcttcat
121 cttttttttt ggtcactgtc cttttaaact tgatcaaata aaggacagtg ggtcatataa
181 gttactgctt tcagggtccc ttatatctga ataaaggagt gtgggcagac actttttgga
241 agagtctgtc tgggtgatcc tggtagaagc cccattaggg tcactgtcca gtgcttaggg
301 ttgttactga gaagcactgc cgagcttgtg agaaggaagg gatggatagt agcatccacc
361 tgagtagtct gatcagtcgg catgatgacg aagccacgag aacatcgacc tcagaaggac
421 tggaggaagg tgaagtggag ggagagacgc tcctgatcgt cgaatccgag gatcaggcat
481 cagtggactt atcgcacgac cagagtgggg attccctcaa cagtgatgaa ggagacgtgt
541 cttggatgga ggagcagctg tcctacttct gtgacaagtg ccaaaaatgg ataccagcca
601 gtcagctgag ggaacagctc agttacctta agggtgataa tttttttagg tttacttgtt
661 cggattgctc agcagatggc aaggagcagt atgaaaggct gaagctgaca tggcagcaag
721 tcgtcatgtt ggcaatgtac aacttgtctc tggaaggaag tggacgtcaa ggttatttca
781 ggtggaaaga agatatctgt gcttttattg agaaacattg gactttttta ctagggaata
841 ggaaaaagac gtctacctgg tggagcaccg tggcaggttg cctcagcgtg ggaagtccca
901 tgtacttccg ttcaggtgct caggaatttg gagagccagg atggtggaaa cttgttcata
961 acaagccccc aacgatgaaa cctgaaggag agaagttgtc tgcctctact ttgaaaataa
1021 aagcagcctc aaaaccaact ttagatccca tcattactgt tgagggactt agaaaacgag
1081 caagtcggaa tcctgtggaa tctgccatgg aattaaaaga gaaaaggtct cgaactcagg
1141 aagcaaaaga cattagaaga gcccagaagg aggccgctgg ctttcttgac aggagcacat
1201 cttctacccc tgtaaaattc ataagccgag gccgcaggcc agatgtgatt ctggaaaaag
1261 gcgaagtgat tgacttttcc tccttgagct cctctgaccg caccccgctg acaagcccat
1321 ctccttctcc ttctctggat ttctctgccc ctggtacacc tgcctctcat tctgccacac
1381 ctagcttgct ttcagaagca gatctgattc cagatgtgat gcccccacaa gccttgtttc
1441 atgatgacga tgagatggaa ggcgatggag tcatagaccc agggatggag tacgtcccac
1501 cccctgctgg gtcagtagct tctgggccag tggttggggg cagaaagaag gtcagaggcc
1561 ctgaacagat aaagcaggag gtagagagtg aggaggaaaa acccgacagg atggatattg
1621 acagtgaaga cacagattca aacacatctt tgcaaacaag ggctagagaa aagaggaagc
1681 ctcagctgga gaaggacaca aagccgaaag agcccaggta tactcccgtg agcatctacg
1741 aggaaaagct gctgctcaag aggctggaag cttgtcccgg tgctgttgcc atgactccgg
1801 aagctcggag actgaaacgc aaactgattg tcagacaagc gaaaagggat aggggattac
1861 cactttttga cttggatcaa gttgttaatg ctgctctttt gttagttgac gggatttatg
1921 gagccaaaga aggaggaatt tccagacttc cagctggaca agccacgtac agaaccacct
1981 gtcaggactt cagaatcctt gaccgatacc agacttcctt gccgtccagg aagggatttc
2041 gacaccagac caccaagttt ttgtatcgct tggtaggatc agaagatatg gctgtggacc
2101 agagtattgt cagcccttat acctctcgga tcttgaaacc ttatatcagg cgtgattatg
2161 aaacaaagcc acccaaactg cagctcctgt cacagattcg ttcccacctg cacaggagcg
2221 accctcactg gacgccggag cccgacgcac ctctcgatta ctgttatgtg cggccaaatc
2281 acatcccaac gatcaactcc atgtgtcagg agtttttttg gcctggcatt gacctgtctg
2341 agtgtctgca gtacccagac ttcagtgttg ttgttcttta taaaaaagtc atcattgcct
2401 ttggcttcat ggttcctgat gtgaaataca atgaagctta catttcattt ctgttcgtcc
2461 accctgaatg gagaagagca gggattgcaa ctttcatgat ctatcatctg attcagacct
2521 gcatgggcaa ggacgtaacc cttcacgtct cagcaagcaa ccccgctatg ctactgtacc
2581 agaagtttgg attcaagact gaagaatatg tattagattt ctatgataaa tattacccat
2641 tggagagtac agagtgtaaa cacgcattct ttctgaggct ccggcgctga tgcgaataca
2701 gctcacagag aaacgcatgt gctattggag aacaggtctt tgtggagatc taaaggcagt
2761 gattgatttc acagggagct ctaatctctg tgattacatg gtccttcaaa ctcccaacca
2821 aagtgagaaa agcggcatgc agtgaaatga gcagtgagca gccctttagc aaaatcgccc
2881 tccagtcctt cctggagatg ccttcagcca gcatcccaga ctccacagtt atttatgaac
2941 gatgtcgtga ttctccctcc acctgacagt ttgtaagagt gaaagagcat ctaacctgat
3001 gctcttggag agagataacc tgtctgtcat aacttaaagg atgagaaaat gtggtgtagc
3061 tattaaagat tcatgcagtc ccaaaaggca ctgtcctggg atgatgagag attataaggt
3121 gatttcataa aaggaatcca accctgtgcc cggccattga tgtgttgtca ttgaatccag
3181 gaggatttct agggcactga agttttgttg tttcttttgc tgactttggt tacagtcaga
3241 aaaaataaac tagatgtttg tgtctaaaaa aaaaaaaaaa aaaaa
//