LOCUS BC007514 2398 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens v-raf murine sarcoma 3611 viral oncogene homolog, mRNA
(cDNA clone MGC:4512 IMAGE:2966604), complete cds.
ACCESSION BC007514
VERSION BC007514.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2398)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2398)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007514.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4502192.
FEATURES Location/Qualifiers
source 1..2398
/db_xref="H-InvDB:HIT000033267"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4512 IMAGE:2966604"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2398
/gene="ARAF"
/gene_synonym="A-RAF"
/gene_synonym="PKS2"
/gene_synonym="RAFA1"
/db_xref="GeneID:369"
/db_xref="HGNC:HGNC:646"
/db_xref="MIM:311010"
CDS 90..1919
/gene="ARAF"
/gene_synonym="A-RAF"
/gene_synonym="PKS2"
/gene_synonym="RAFA1"
/codon_start=1
/product="ARAF protein"
/protein_id="AAH07514.1"
/db_xref="GeneID:369"
/db_xref="HGNC:HGNC:646"
/db_xref="MIM:311010"
/translation="MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDS
LDKALKVRGLNQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFV
RKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQPSRFYHS
VQDLSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTST
PNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSK
SPAEQRERKSLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHG
DVAVKVLKVSQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSS
LYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGD
FGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTG
SLPYSHIGCRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQI
LATIELLQRSLPKIERSASEPSLHRTQADELPACLLSAARLVP"
BASE COUNT 504 a 765 c 633 g 496 t
ORIGIN
1 gagacggcgg cggctgtagc ggcgtgacag gagccccatg gcacctgccc agccccacct
61 cagcccatct tgacaaaatc taaggctcca tggagccacc acggggcccc cctgccaatg
121 gggccgagcc atcccgggca gtgggcaccg tcaaagtata cctgcccaac aagcaacgca
181 cggtggtgac tgtccgggat ggcatgagtg tctacgactc tctagacaag gccctgaagg
241 tgcggggtct aaatcaggac tgctgtgtgg tctaccgact catcaaggga cgaaagacgg
301 tcactgcctg ggacacagcc attgctcccc tggatggcga ggagctcatt gtcgaggtcc
361 ttgaagatgt cccgctgacc atgcacaatt ttgtacggaa gaccttcttc agcctggcgt
421 tctgtgactt ctgccttaag tttctgttcc atggcttccg ttgccaaacc tgtggctaca
481 agttccacca gcattgttcc tccaaggtcc ccacagtctg tgttgacatg agtaccaacc
541 gccaacagcc ctcaaggttc taccacagtg tccaggattt gtccggaggc tccagacagc
601 atgaggctcc ctcgaaccgc cccctgaatg agttgctaac cccccagggt cccagccccc
661 gcacccagca ctgtgacccg gagcacttcc ccttccctgc cccagccaat gcccccctac
721 agcgcatccg ctccacgtcc actcccaacg tccatatggt cagcaccacg gcccccatgg
781 actccaacct catccagctc actggccaga gtttcagcac tgatgctgcc ggtagtagag
841 gaggtagtga tggaaccccc cgggggagcc ccagcccagc cagcgtgtcc tcggggagga
901 agtccccaca ttccaagtca ccagcagagc agcgcgagcg gaagtccttg gccgatgaca
961 agaagaaagt gaagaacctg gggtaccggg actcaggcta ttactgggag gtaccaccca
1021 gtgaggtgca gctgctgaag aggatcggga cgggctcgtt tggcaccgtg tttcgagggc
1081 ggtggcatgg cgatgtggcc gtgaaggtgc tcaaggtgtc ccagcccaca gctgagcagg
1141 cccaggcttt caagaatgag atgcaggtgc tcaggaagac gcgacatgtc aacatcttgc
1201 tgtttatggg cttcatgacc cggccgggat ttgccatcat cacacagtgg tgtgagggct
1261 ccagcctcta ccatcacctg catgtggccg acacacgctt cgacatggtc cagctcatcg
1321 acgtggcccg gcagactgcc cagggcatgg actacctcca tgccaagaac atcatccacc
1381 gagatctcaa gtctaacaac atcttcctac atgaggggct cacggtgaag atcggtgact
1441 ttggcttggc cacagtgaag actcgatgga gcggggccca gcccttggag cagccctcag
1501 gatctgtgct gtggatggca gctgaggtga tccgtatgca ggacccgaac ccctacagct
1561 tccagtcaga cgtctatgcc tacggggttg tgctctacga gcttatgact ggctcactgc
1621 cttacagcca cattggctgc cgtgaccaga ttatctttat ggtgggccgt ggctatctgt
1681 ccccggacct cagcaaaatc tccagcaact gccccaaggc catgcggcgc ctgctgtctg
1741 actgcctcaa gttccagcgg gaggagcggc ccctcttccc ccagatcctg gccacaattg
1801 agctgctgca acggtcactc cccaagattg agcggagtgc ctcggaaccc tccttgcacc
1861 gcacccaggc cgatgagttg cctgcctgcc tactcagcgc agcccgcctt gtgccttagg
1921 ccccgcccaa gccaccaggg agccaatctc agccctccac gccaaggagc cttgcccacc
1981 agccaatcaa tgttcgtctc tgccctgatg ctgcctcagg atcccccatt ccccaccctg
2041 ggagatgagg gggtccccat gtgcttttcc agttcttctg gaattggggg acccccgcca
2101 aagactgagc cccctgtctc ctccatcatt tggtttcctc ttggctttgg ggatacttct
2161 aaattttggg agctcctcca tctccaatgg ctgggatttg tggcagggat tccactcaga
2221 acctctctgg aatttgtgcc tgatgtgcct tccactggat tttggggttc ccagcacccc
2281 atgtggattt tggggggtcc cttttgtgtc tcccccgcca ttcaaggact cctctctttc
2341 ttcaccaaga agcacagaat tctgctggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//