LOCUS BC007502 628 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HIG1 domain family, member 2A, mRNA (cDNA clone
MGC:3907 IMAGE:2959830), complete cds.
ACCESSION BC007502
VERSION BC007502.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 628)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 628)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC007502.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851396.
FEATURES Location/Qualifiers
source 1..628
/db_xref="H-InvDB:HIT000033256"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3907 IMAGE:2959830"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..628
/gene="HIGD2A"
/gene_synonym="MGC2198"
/db_xref="GeneID:192286"
/db_xref="HGNC:HGNC:28311"
CDS 38..358
/gene="HIGD2A"
/gene_synonym="MGC2198"
/codon_start=1
/product="HIG1 domain family, member 2A"
/protein_id="AAH07502.1"
/db_xref="GeneID:192286"
/db_xref="HGNC:HGNC:28311"
/translation="MATPGPVIPEVPFEPSKPPVIEGLSPTVYRNPESFKEKFVRKTR
ENPVVPIGCLATAAALTYGLYSFHRGNSQRSQLMMRTRIAAQGFTVAAILLGLAVTAM
KSRP"
BASE COUNT 143 a 194 c 147 g 144 t
ORIGIN
1 cggagtcccg attttctcct gctgctgtgg cccggacatg gcgactcccg gccctgtgat
61 tccggaggtc ccctttgaac catcgaagcc tccagtcatt gaggggctga gccccactgt
121 ttacaggaat ccagagagtt tcaaggaaaa gttcgttcgc aagacccgcg agaacccggt
181 ggtacccata ggttgcctgg ccacggcggc cgccctcacc tacggcctct actccttcca
241 ccggggcaac agccagcgct ctcagctcat gatgcgcacc cggatcgccg cccagggttt
301 cacggtcgca gccatcttgc tgggtctggc tgtcactgct atgaagtctc gaccctaagc
361 ccagggtctg gccttgaaag ctccgcagaa atgattccaa aacccaggga gcaaccactg
421 gccctaccgt gggacttact ccctcctctc ctttgagagg cccatgtgtc gctggggagg
481 aagtgaccct ttgtgtaact gtaaccgaaa gttttttcaa aaatcctaga tgctgttgtt
541 tgaatgttac atacttctat ttgtgccaca tctcccctcc actcccctgc ttaataaact
601 ctaaaaatcc aaaaaaaaaa aaaaaaaa
//