LOCUS BC007461 973 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interleukin 18 (interferon-gamma-inducing factor),
mRNA (cDNA clone MGC:12320 IMAGE:3681009), complete cds.
ACCESSION BC007461
VERSION BC007461.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: c Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27502389.
FEATURES Location/Qualifiers
source 1..973
/db_xref="H-InvDB:HIT000033242"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12320 IMAGE:3681009"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..973
/gene="IL18"
/gene_synonym="IGIF"
/gene_synonym="IL-18"
/gene_synonym="IL-1g"
/gene_synonym="IL1F4"
/gene_synonym="MGC12320"
/db_xref="GeneID:3606"
/db_xref="HGNC:HGNC:5986"
/db_xref="MIM:600953"
CDS 221..802
/gene="IL18"
/gene_synonym="IGIF"
/gene_synonym="IL-18"
/gene_synonym="IL-1g"
/gene_synonym="IL1F4"
/gene_synonym="MGC12320"
/codon_start=1
/product="interleukin 18 (interferon-gamma-inducing
factor)"
/protein_id="AAH07461.1"
/db_xref="GeneID:3606"
/db_xref="HGNC:HGNC:5986"
/db_xref="MIM:600953"
/translation="MAAEPVEDNCINFVAMKFIDNTLYFIAEDDENLESDYFGKLESK
LSVIRNLNDQVLFIDQGNRPLFEDMTDSDCRDNAPRTIFIISMYKDSQPRGMAVTISV
KCEKISTLSCENKIISFKEMNPPDNIKDTKSDIIFFQRSVPGHDNKMQFESSSYEGYF
LACEKERDLFKLILKKEDELGDRSIMFTVQNED"
BASE COUNT 317 a 204 c 198 g 254 t
ORIGIN
1 attctctccc cagcttgctg agccctttgc tcccctggcg actgcctgga cagtcagcaa
61 ggaattgtct cccagtgcat tttgccctcc tggctgccaa cgctggctgc taaagtggct
121 gccacctgct gcagtctaca cagcttcggg aagaggaaag gaacctcaga ccttccagat
181 cgcttcctct cgcaacaaac tatttgtcgc aggaataaag atggctgctg aaccagtaga
241 agacaattgc atcaactttg tggcaatgaa atttattgac aatacgcttt actttatagc
301 tgaagatgat gaaaacctgg aatccgatta ctttggcaag cttgaatcta aattatcagt
361 cataagaaat ttgaatgacc aagttctctt cattgaccaa ggaaatcggc ctctatttga
421 agatatgact gattctgact gtagagataa tgcaccccgg accatattta ttataagtat
481 gtataaagat agccagccta gaggtatggc tgtaactatc tctgtgaagt gtgagaaaat
541 ttcaactctc tcctgtgaga acaaaattat ttcctttaag gaaatgaatc ctcctgataa
601 catcaaggat acaaaaagtg acatcatatt ctttcagaga agtgtcccag gacatgataa
661 taagatgcaa tttgaatctt catcatacga aggatacttt ctagcttgtg aaaaagagag
721 agaccttttt aaactcattt tgaaaaaaga ggatgaattg ggggatagat ctataatgtt
781 cactgttcaa aacgaagact agctattaaa atttcatgcc gggcgcagtg gctcacgcct
841 gtaatcccag ccctttggga ggctgaggcg ggcagatcgc cagaggtcag gtgttcaaga
901 ccagcctgac caacatggtg aaacctcatc tctactaaaa atacaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaa
//