LOCUS BC007426 887 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TAF9 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 32kDa, mRNA (cDNA clone MGC:3647
IMAGE:2966411), complete cds.
ACCESSION BC007426
VERSION BC007426.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 887)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 887)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC007426.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: g Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62865616.
FEATURES Location/Qualifiers
source 1..887
/db_xref="H-InvDB:HIT000033213_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3647 IMAGE:2966411"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..887
/gene="TAF9"
/gene_synonym="AD-004"
/gene_synonym="AK6"
/gene_synonym="CGI-137"
/gene_synonym="CINAP"
/gene_synonym="CIP"
/gene_synonym="MGC1603"
/gene_synonym="MGC3647"
/gene_synonym="MGC5067"
/gene_synonym="MGC:1603"
/gene_synonym="MGC:3647"
/gene_synonym="MGC:5067"
/gene_synonym="TAFII31"
/gene_synonym="TAFII32"
/gene_synonym="TAFIID32"
/db_xref="GeneID:6880"
/db_xref="HGNC:HGNC:11542"
/db_xref="MIM:600822"
CDS 18..536
/gene="TAF9"
/gene_synonym="AD-004"
/gene_synonym="AK6"
/gene_synonym="CGI-137"
/gene_synonym="CINAP"
/gene_synonym="CIP"
/gene_synonym="MGC1603"
/gene_synonym="MGC3647"
/gene_synonym="MGC5067"
/gene_synonym="MGC:1603"
/gene_synonym="MGC:3647"
/gene_synonym="MGC:5067"
/gene_synonym="TAFII31"
/gene_synonym="TAFII32"
/gene_synonym="TAFIID32"
/codon_start=1
/product="TAF9 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 32kDa"
/protein_id="AAH07426.1"
/db_xref="GeneID:6880"
/db_xref="HGNC:HGNC:11542"
/db_xref="MIM:600822"
/translation="MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLY
DGYDEEYDCPILDEDRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVL
YERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQIL
KWIEQWIKDHNS"
BASE COUNT 325 a 131 c 182 g 249 t
ORIGIN
1 ccgtcgcggc ggggaccatg ttgcttccga acatcctgct caccggtaca ccaggggttg
61 gaaaaaccac actaggcaaa gaacttgcgt caaaatcagg actgaaatac attaatgtgg
121 gtgatttagc tcgagaagag caattgtatg atggctatga tgaagagtat gactgtccca
181 ttttagatga agacagagta gttgatgagt tagataacca aatgagagaa ggtggagtta
241 ttgttgatta ccatggttgt gatttcttcc ctgaacgctg gtttcatata gtttttgtgc
301 tgagaacaga taccaatgta ttgtacgaaa gacttgaaac aaggggttat aatgagaaga
361 aactaacaga caatattcag tgtgagattt ttcaagttct ttatgaagaa gccacagcat
421 cctacaagga agaaatcgtg catcagctgc ccagtaataa accagaagag ctagaaaata
481 atgtagatca gatcttgaaa tggattgagc agtggatcaa agatcataac tcttgactta
541 taaggctagc tacttaataa tcactcttgt tgatatctct gccgacatca tagaaattgt
601 tcaagtgtca gtaacacttt attaaaatca tgttgcagaa ccagcaggtg gatagtatat
661 aggtttatgc ctgtgtttct ttttctccat gagaaagcta aacatgaaat ataatgaata
721 tagtattatt aaggattgag acaaaaactg tgattttaat acttaaattg ctaaagaata
781 aataaatctg acaaaatggg tggatatctt ttaagtttat tacagaaaaa aatgcagatg
841 atctcttaaa ataaaactaa agataaagca aaaaaaaaaa aaaaaaa
//