LOCUS BC007392 1545 bp mRNA linear HUM 09-DEC-2003
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein D-like, mRNA
(cDNA clone IMAGE:3832877), partial cds.
ACCESSION BC007392
VERSION BC007392.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1545)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1545)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007392.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: h Column: 8.
FEATURES Location/Qualifiers
source 1..1545
/db_xref="H-InvDB:HIT000033188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3832877"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1545
/gene="HNRPDL"
/gene_synonym="HNRNP"
/gene_synonym="JKTBP"
/gene_synonym="JKTBP2"
/gene_synonym="laAUF1"
/db_xref="GeneID:9987"
/db_xref="MIM:607137"
CDS <1..1250
/gene="HNRPDL"
/gene_synonym="HNRNP"
/gene_synonym="JKTBP"
/gene_synonym="JKTBP2"
/gene_synonym="laAUF1"
/codon_start=3
/product="HNRPDL protein"
/protein_id="AAH07392.2"
/db_xref="GeneID:9987"
/db_xref="MIM:607137"
/translation="RLSHVPPPLFPSAPATLASRSLSHWRPRPPRQLAPLLPSLAPSS
ARQGARRAQRHVTAQQPSRLAGGAAIKGGRRRRPDLFRRHFKSSSIQRSAAAAAATRT
ARQHPPADSSVTMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLT
EYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA
KALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITY
TDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYRQQQQQQKGGRGAAAGGRGGTRGRG
RGQGQNWNQGFNNYYDQGYGNYNSAYGGDQNYSGYGGYDYTGYNYGNYGYGQGYADYS
GQQSTYGKASRGGGNHQNNYQPY"
misc_feature 432..650
/gene="HNRPDL"
/gene_synonym="HNRNP"
/gene_synonym="JKTBP"
/gene_synonym="JKTBP2"
/gene_synonym="laAUF1"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
misc_feature 687..905
/gene="HNRPDL"
/gene_synonym="HNRNP"
/gene_synonym="JKTBP"
/gene_synonym="JKTBP2"
/gene_synonym="laAUF1"
/note="RRM; Region: RNA recognition motif"
/db_xref="CDD:smart00360"
BASE COUNT 459 a 335 c 385 g 366 t
ORIGIN
1 ccaggctttc ccatgtgccg ccgccattgt tcccctccgc tcccgctact ttagcctccc
61 gcagcctctc ccattggcgg ccgcggccgc cgcggcagct agccccgctc ctcccttcgc
121 tcgctcccag ctccgcccgg cagggggcgc gccgggccca gcgccacgtc accgcccagc
181 agccctcccg attggcgggc ggggcggcta taaagggagg gcgcaggcgg cgcccggatc
241 tcttccgccg ccattttaaa tccagctcca tacaacgctc cgccgccgct gctgccgcga
301 cccggactgc gcgccagcac ccccctgccg acagctccgt cactatggag gatatgaacg
361 agtacagcaa tatagaggaa ttcgcagagg gatccaagat caacgcgagc aagaatcagc
421 aggatgacgg taaaatgttt attggaggct tgagctggga tacaagcaaa aaagatctga
481 cagagtactt gtctcgattt ggggaagttg tagactgcac aattaaaaca gatccagtca
541 ctgggagatc aagaggattt ggatttgtgc ttttcaaaga tgctgctagt gttgataagg
601 ttttggaact gaaagaacac aaactggatg gcaaattgat agatcccaaa agggccaaag
661 ctttaaaagg gaaagaacct cccaaaaagg tttttgtggg tggattgagc ccggatactt
721 ctgaagaaca aattaaagaa tattttggag cctttggaga gattgaaaat attgaacttc
781 ccatggatac aaaaacaaat gaaagaagag gattttgttt tatcacatat actgatgaag
841 agccagtaaa aaaattgtta gaaagcagat accatcaaat tggttctggg aagtgtgaaa
901 tcaaagttgc acaacccaaa gaggtatata ggcagcaaca gcaacaacaa aaaggtggaa
961 gaggtgctgc agctggtgga cgaggtggta cgaggggtcg tggccgaggt cagggccaaa
1021 actggaacca aggatttaat aactattatg atcaaggata tggaaattac aatagtgcct
1081 atggtggtga tcaaaactat agtggctatg gcggatatga ttatactggg tataactatg
1141 ggaactatgg atatggacag ggatatgcag actacagtgg ccaacagagc acttatggca
1201 aggcatctcg agggggtggc aatcaccaaa acaattacca gccatactaa aggagaacat
1261 tggagaaaac aggaggagat gttaaagtaa cccatcttgc aggacgacat tgaagattgg
1321 tcttctgttg atctaagatg attattttgt aaaagacttt ctagtgtaca agacaccatt
1381 gtgtccaact gtatatagct gccaattagt tttctttgtt tttactttgt cctttgctat
1441 ctgtgttatg actcaatgtg gatttgttta tacacatttt atttgtatca tttcatgtta
1501 aacctcaaat aaatgcttcc ttatgtgaaa aaaaaaaaaa aaaaa
//