LOCUS BC007389 1134 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 16kDa, V0 subunit
c, mRNA (cDNA clone MGC:16271 IMAGE:3831016), complete cds.
ACCESSION BC007389
VERSION BC007389.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1134)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1134)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007389.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913436.
FEATURES Location/Qualifiers
source 1..1134
/db_xref="H-InvDB:HIT000033186"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16271 IMAGE:3831016"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1134
/gene="ATP6V0C"
/gene_synonym="VATL"
/gene_synonym="Vma3"
/db_xref="GeneID:527"
/db_xref="HGNC:HGNC:855"
/db_xref="MIM:108745"
CDS 123..590
/gene="ATP6V0C"
/gene_synonym="VATL"
/gene_synonym="Vma3"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 16kDa, V0
subunit c"
/protein_id="AAH07389.1"
/db_xref="GeneID:527"
/db_xref="HGNC:HGNC:855"
/db_xref="MIM:108745"
/translation="MSESKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAM
SVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDISLYKSFLQLGAGLSVGLS
GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK"
BASE COUNT 233 a 386 c 285 g 230 t
ORIGIN
1 ggctgacggg ccggatcgcc ttcgccgccg cccgcccgca aaccttcgtg cccggcccgt
61 cctcgccccc gcctccgcca ccgcctcggc ccgcagagct tgccccctcc ccacccgcag
121 acatgtccga gtccaagagc ggccccgagt atgcttcgtt tttcgccgtc atgggcgcct
181 cggccgccat ggtcttcagc gccctgggcg ctgcctatgg cacagccaag agcggtaccg
241 gcattgcggc catgtctgtc atgcggccgg agcagatcat gaagtccatc atcccagtgg
301 tcatggctgg catcatcgcc atctacggcc tggtggtggc agtcctcatc gccaactccc
361 tgaatgacga catcagcctc tacaagagct tcctccagct gggcgccggc ctgagcgtgg
421 gcctgagcgg cctggcagcc ggctttgcca tcggcatcgt gggggacgct ggcgtgcggg
481 gcaccgccca gcagccccga ctattcgtgg gcatgatcct gattctcatc ttcgccgagg
541 tgctcggcct ctacggtctc atcgtcgccc tcatcctctc cacaaagtag accctctccg
601 agcccaccag ccacagaata ttatgtaaag accacccctc ctcattccag aacgaacagc
661 ctgacacata cgcacggggc cgccgccccc agtagttggt cttgtacatg cgcagtgtcc
721 tagtgcccat cgtctgtttc cccggccttg cccccgcccg ccccgtgccg tggacatctg
781 ggcccactca tcgcccctcc aggcccccgg cgccccaccc cctagagtgc tctgtgtatg
841 cggatgattt agaattgtca tttctcttta ctggatgttt atttataaag atctggcctg
901 ttcctgcgtc tgcggagcgg cccttgtctc ccagctatct ataaccttag ctagagtgtc
961 gccttgtggg ttcctgttgc tgagacttcc tggatggagc cgccctcacc gccgggcccg
1021 tggccctgcg cggagctgtg tccaataaag ttcttggatg tgaaaaaaaa aaaaaaaaaa
1081 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//