LOCUS BC007348 1951 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens uridine phosphorylase 1, mRNA (cDNA clone MGC:1587
IMAGE:2966930), complete cds.
ACCESSION BC007348
VERSION BC007348.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1951)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1951)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC007348.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507838.
FEATURES Location/Qualifiers
source 1..1951
/db_xref="H-InvDB:HIT000033165"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1587 IMAGE:2966930"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1951
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/db_xref="GeneID:7378"
/db_xref="MIM:191730"
CDS 624..1556
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/codon_start=1
/product="UPP1 protein"
/protein_id="AAH07348.1"
/db_xref="GeneID:7378"
/db_xref="MIM:191730"
/translation="MAATGANAEKAESHNDCPVRLLNPNIAKMKEDILYHFNLTTSRH
NFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGLDCPGRDYPNICAGTDRYAMYKVGP
VLSVSHGMGIPSISIMLHELIKLLYYARCSNVTIIRIGTSGGIGLEPGTVVITEQAVD
TCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQG
RLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRL
EGDQISSPRNVLSEYQQRPQRLVSYFIKKKLSKA"
misc_feature 708..1466
/gene="UPP1"
/gene_synonym="UDRPASE"
/gene_synonym="UP"
/gene_synonym="UPASE"
/gene_synonym="UPP"
/note="Udp; Region: Uridine phosphorylase [Nucleotide
transport and metabolism]"
/db_xref="CDD:COG2820"
BASE COUNT 449 a 528 c 542 g 432 t
ORIGIN
1 gcgggaactc ccaggatcag gaaggtccca gagaaactcc ccagggggga agccgaggcc
61 gtccagagag atccagggta cacacagtga cagtgccagc tccacattcc cgaccaccgg
121 gccagggctg gttccacgct gtcatttctc tccgctggcc ccagccgcgg ggccaccgcc
181 agacagacag accggggatc ctgcctggcg gcgtgacctt gggttagtcc tagagccgct
241 tctagcccgg tttcctccgc cccaggttag gaccacgtgg ggcggggccg ctcgcagact
301 ccatatgaga ttcacctcgc aagtggttcc ctcattcgag tgctccggcg cacagacccg
361 cgccccgccg tccgcgagcc tcccgagagc cgtcccttcg tccggccctg gagcattgcg
421 tttgtcgccg gtgtcgcagt gcgaggatgg cgccgcgggt gtagcggctc tctgcgcagg
481 ccgagtgggc ttggtgaggt gactcgcggt cgcgggtgac tcgccggcag gacactgcct
541 ggaacgcctg gagcgcctcc cactgcagac gtctgtccgc ctccagccgc tctcctctga
601 cgggtcctgc ctcagttggc ggaatggcgg ccacgggagc caatgcagag aaagctgaaa
661 gtcacaatga ttgccccgtc agacttttaa atccaaacat agcaaaaatg aaagaagata
721 ttctctatca tttcaatctc accactagca gacacaattt cccagccttg tttggagatg
781 tgaagtttgt gtgtgttggt ggaagcccct cccggatgaa agccttcatc aggtgcgttg
841 gtgcagagct gggccttgac tgcccaggta gagactatcc caacatctgt gcgggaactg
901 accgctatgc catgtataaa gtaggaccgg tgctgtctgt cagtcatggt atgggcattc
961 cttctatctc aatcatgttg catgagctca taaagctgct gtactatgcc cggtgctcca
1021 acgtcactat catccgcatt ggcacttctg gtgggatagg tctggagccc ggcactgtgg
1081 tcataacaga gcaggcagtg gatacctgct tcaaggcaga gtttgagcag attgtcctgg
1141 ggaagcgggt catccggaaa acggacctta acaagaagct ggtgcaggag ctgttgctgt
1201 gttctgcaga gctgagcgag ttcaccacag tggtggggaa caccatgtgc accttggact
1261 tctatgaagg gcaaggccgt ctggatgggg ctctctgctc ctacacggag aaggacaagc
1321 aggcgtatct ggaggcagcc tatgcagccg gcgtccgcaa tatcgagatg gagtcctcgg
1381 tgtttgccgc catgtgcagc gcctgcggcc tccaagcggc cgtggtgtgt gtcaccctcc
1441 tgaaccgcct ggaaggggac cagatcagca gccctcgcaa tgtgctcagc gagtaccagc
1501 agaggccgca gcggctggtg agctacttca tcaagaagaa actgagcaag gcctgagcgc
1561 tgccctgcac ctccgcagac ctgctgtgat gacttgccat taaaagcatt gtccaaaatc
1621 ccctgttgtg tggactttga gcacacttta cacaagaatc tagaaaatca gatcgcgatt
1681 aagagacaga gaatcttgga ttaaccgcat gggagatgtt cttccttttg aagtttcatt
1741 ggagcatttt caatgatgtt agcctgattt ggggtttctt caagaacatt ctaccaaatt
1801 tttgtactat ttctagggaa atttttcaga ctttaaaatt ctaatggtag tcagatttca
1861 tgtcactaaa caagaaatct gacaatagtg ccaggaaact aatttcctga tacattaaaa
1921 aaattccatg caaaaaaaaa aaaaaaaaaa a
//