LOCUS BC007334 1405 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens centromere protein N, mRNA (cDNA clone MGC:15098
IMAGE:3830110), complete cds.
ACCESSION BC007334
VERSION BC007334.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1405)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1405)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007334.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725678.
FEATURES Location/Qualifiers
source 1..1405
/db_xref="H-InvDB:HIT000033153"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15098 IMAGE:3830110"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1405
/gene="CENPN"
/gene_synonym="BM039"
/gene_synonym="CENP-N"
/gene_synonym="FLJ13607"
/gene_synonym="FLJ22660"
/db_xref="GeneID:55839"
/db_xref="HGNC:HGNC:30873"
CDS 737..1351
/gene="CENPN"
/gene_synonym="BM039"
/gene_synonym="CENP-N"
/gene_synonym="FLJ13607"
/gene_synonym="FLJ22660"
/codon_start=1
/product="centromere protein N"
/protein_id="AAH07334.1"
/db_xref="GeneID:55839"
/db_xref="HGNC:HGNC:30873"
/translation="MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQR
KESVVQHLIHLCEEKRASISDAALLDIIYMQFHQHQKVWDVFQMSKGPGEDVDLFDMK
QFKNSFKKILQRALKNVTVSFRETEENAVWIRIAWGTQYTKPNQYKPTYVVYYSQTPY
AFTSSSMLRRNTPLLGQELEATGKIYLRQEEIILDITEMKKACN"
BASE COUNT 365 a 377 c 396 g 267 t
ORIGIN
1 cacctcgctc gcagcctccc cagcgcagca gcccggctgt gggcctgcgg cagccgggtc
61 ttcctggtcc ccacctcctg gggccgacgg gcggcaggaa ggggctcggc gggacgcgcc
121 gtcagggacc tgaggaggaa caacggaacg cgttcggaac ggcctggact cccgagactc
181 acccgactcg tggccacacc gggagaactg aagcggcagt agccggcgga gacgcccgac
241 ccgaaggccg gctgctaggg agcagacagc tgaaccgctt gccagacgcc gaaacccagt
301 gacgccctcc accgctccac cgtgctcccg gctccccgcc cccgccgccc gcgggcccca
361 aggcgcatgc gccgcctgtc ctggaggggc ccatttccgt ccgtcgtggg gggaggcaca
421 gtgagtccac tggggcacgg cagcgtctaa gccacaagcc gagcacataa gccaggtcct
481 aacggagcct atgtgtaagt ccactactgg tgcaaggttg cacacttcta agaagagcgg
541 cgtggggggc tcggcgacct tcgcttcagt cgctcccccg tgcagtcccc tgtgcccaag
601 acacagcctg atgcttgtgc tccggtgggc ggagcttgga ggcggcggga actgcaattg
661 gtggctttga aggcgcggcg agcgggaaca gctcttgagg agtgagactg caggagatgt
721 gggccgtgcc aaagagatgg atgagactgt tgctgagttc atcaagagga ccatcttgaa
781 aatccccatg aatgaactga caacaatcct gaaggcctgg gattttttgt ctgaaaatca
841 actgcagact gtaaatttcc gacagagaaa ggaatctgta gttcagcact tgatccatct
901 gtgtgaggaa aagcgtgcaa gtatcagtga tgctgccctg ttagacatca tttatatgca
961 atttcatcag caccagaaag tttgggatgt ttttcagatg agtaaaggac caggtgaaga
1021 tgttgacctt tttgatatga aacaatttaa aaattcgttc aagaaaattc ttcagagagc
1081 attaaaaaat gtgacagtca gcttcagaga aactgaggag aatgcagtct ggattcgaat
1141 tgcctgggga acacagtaca caaagccaaa ccagtacaaa cctacctacg tggtgtacta
1201 ctcccagact ccgtacgcct tcacgtcctc ctccatgctg aggcgcaata caccgcttct
1261 gggtcaggag ttagaagcta ctgggaaaat ctacctccga caagaggaga tcattttaga
1321 tattaccgaa atgaagaaag cttgcaatta gtgaacatga aaggaaaata aaaattcctc
1381 acagtcaaaa aaaaaaaaaa aaaaa
//