LOCUS BC007319 2713 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens YKT6 v-SNARE homolog (S. cerevisiae), mRNA (cDNA clone
MGC:1281 IMAGE:2989381), complete cds.
ACCESSION BC007319
VERSION BC007319.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2713)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2713)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007319.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: e Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34304384.
FEATURES Location/Qualifiers
source 1..2713
/db_xref="H-InvDB:HIT000033143"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1281 IMAGE:2989381"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2713
/gene="YKT6"
/db_xref="GeneID:10652"
/db_xref="HGNC:HGNC:16959"
/db_xref="MIM:606209"
CDS 88..684
/gene="YKT6"
/codon_start=1
/product="YKT6 v-SNARE homolog (S. cerevisiae)"
/protein_id="AAH07319.1"
/db_xref="GeneID:10652"
/db_xref="HGNC:HGNC:16959"
/db_xref="MIM:606209"
/translation="MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTS
QLIVERSSKGTRASVKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFS
KQVDRIDWPVGSPATIHYPALDGHLSRYQNPREADPMTKVQAELDETKIILHNTMESL
LERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM"
BASE COUNT 598 a 678 c 804 g 633 t
ORIGIN
1 gcggcggtcc cgaggggcgg cggccgcgct gctccctgag aacgggtccc gcagctgggc
61 aggcgggcgg cctgagggcg cggagccatg aagctgtaca gcctcagcgt cctctacaaa
121 ggcgaggcca aggtggtgct gctcaaagcc gcatacgatg tgtcttcctt cagctttttc
181 cagagatcca gcgttcagga attcatgacc ttcacgagtc aactgattgt ggagcgctca
241 tcgaaaggca ctagagcttc tgtcaaagaa caagactatc tgtgccacgt ctacgtccgg
301 aatgatagtc ttgcaggtgt ggtcattgct gacaatgaat acccatcccg ggtggccttt
361 accttgctgg agaaggtact agatgaattc tccaagcaag tcgacaggat agactggcca
421 gtaggatccc ctgctacaat ccattaccca gccctggatg gtcacctcag tagataccag
481 aacccacgag aagctgatcc catgactaaa gtgcaggccg aactagatga gaccaaaatc
541 attctgcaca acaccatgga gtctctgtta gagcgaggtg agaagctaga tgacttggtg
601 tccaaatccg aggtgctggg aacacagtct aaagccttct ataaaactgc ccggaaacaa
661 aactcatgct gtgccatcat gtgatgcagc ctgccagagg cccaatgctg gaatggcacc
721 atcattcaca tcagaactgc agcccctgga aaagaagaga cagccataga cgaggagcca
781 gagtgggggc agactggcca tttttatttt gaagttcctg cgagaaatgg atggtggaag
841 ggtggcgaat gttcaaattc atatgtgtgg tagtgattct tggaaagaat ttgaggtccc
901 caaaggtgta tttttgggca aatgaaacca taaactccga ctggcttctg tagatgccaa
961 agggctcttt ttcagctaac cctgggaagg ctctgtggga gggaggtcgg agccagctgt
1021 ttctcgatct ttggtatatc tttggatctt atttgtacat taatgatatt aacactccag
1081 tggggggtgg ggagtccctg atgctagggc tggggtgggt ggagtttgaa gactcttggg
1141 aaagcctctc ctggggccac tgttgggggt gggagtgagc ccaccacaga ggccacaggc
1201 aggcccccac ttcaggccca aggcctgggg cggggggaac agtcactggg tctcagattc
1261 tgagactgtt gtttagctta cctttctgct aggattggct tcccgcagag ggcagggccc
1321 atcctaagca gcttccaagt cccacaaagg tggcttgtgg gaggatttgg aaggagctgc
1381 attgtgggcg gggagtgtgt gggttgggtt cgtaccagca agtagactag gaactgagcc
1441 caggaaaggg ggatgttttc ctggtgtttg gatggtcagc tgggagtgtc catcatcagg
1501 ggaagatcaa acacaggtgc actcagctgc ccagggcctc tgggacactt gccttgactt
1561 gcaacttgcc ttgaacatca cgatcaaagc agcaggtgct gtggtctctc aaaattgatt
1621 tttatttgac tctgtggctc taagactgcc ttgaaccgcc tgaggcctat gcatctgaac
1681 aagtgggtct ctcccttgag caccaggagt gggtgccagc cggccccgag gattcccagc
1741 accccaccta tggtcttgcc agcataggct tgctagttcc ttcttggtca gaggtagctg
1801 cagagggggg aggccaaggg tttggtctaa gctgtgccct gccacctggc aggaggccca
1861 ctcactgccc aagtcatggc aacaggctgg agcagcccag gagatgggcc taaaatgttc
1921 tggatccctt gggtcctagt gttatgttcc agtctgccca cctgtgctca ggatgcagcc
1981 ctgggatcca gcacccatgg aagcttctgc tgggatggtg tcacctatgg gttttgaacc
2041 agtgtggtat ggtccttggg agctctgctc tgagcttgcc acactgctga gagcacccac
2101 tgtcctgacc agagtctcag tggtcctgac ccccaatgtg ggcaggggct gggcaggagg
2161 gtggggtctg ctgtgggttc agaggactcc acctcctggc tggtttacct gctgctgccc
2221 attttctctg ggtactgctg gccagaggac tttagcctac ccctgaagag cctgtccatg
2281 tcattttcct actgccatag ataccctaag cccagggccc cttgaggccc agactcagcc
2341 tgcccactgg tgccggagac ggagtggagt gggcctggat ccgagggatg ctacctctcc
2401 ctttcccact tgaggaccct ggggagagat gggggcgggg aaaatggagg tatgaatttg
2461 gggtaagagg aagtgagatc tccgcttgca ggtcagcccc tgccttgcag ggcgggctgg
2521 cttgactcag gccctgtgag atagagggcc cagcccagcc ccacccacag atcccctgct
2581 cctgttgtgt tctgttgtaa atcatttggc gagactgtat tttagtaact gctgcctaac
2641 ttccctgtgt tctatttgag aggcgcctgt ctggataaag ttgtcttgaa atttcaaaaa
2701 aaaaaaaaaa aaa
//