LOCUS BC007314 2432 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens potassium channel tetramerisation domain containing 5,
mRNA (cDNA clone MGC:1078 IMAGE:2989642), complete cds.
ACCESSION BC007314
VERSION BC007314.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2432)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2432)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC007314.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: k Column: 10.
FEATURES Location/Qualifiers
source 1..2432
/db_xref="H-InvDB:HIT000033139"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1078 IMAGE:2989642"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2432
/gene="KCTD5"
/gene_synonym="FLJ20040"
/db_xref="GeneID:54442"
/db_xref="HGNC:HGNC:21423"
CDS 9..713
/gene="KCTD5"
/gene_synonym="FLJ20040"
/codon_start=1
/product="potassium channel tetramerisation domain
containing 5"
/protein_id="AAH07314.1"
/db_xref="GeneID:54442"
/db_xref="HGNC:HGNC:21423"
/translation="MAENHCELLSPARGGIGAGLGGGLCRRCSAGLGALAQRPGSVSK
WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPV
LNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRV
LQCQEEELTQMVSTMSDGWKFEQLVSIGSSYNYGNEDQAEFLCVVSKELHNTPYGTAS
EPSEKAKILQERGSRM"
BASE COUNT 509 a 657 c 674 g 592 t
ORIGIN
1 ctgggatcat ggcggagaat cactgcgagc tcctgtcgcc ggcccggggc ggcatcgggg
61 cggggctggg gggcggcctg tgccgccgct gcagcgctgg gctcggcgcc ctggcccagc
121 gccctggcag cgtgtccaag tgggtccgac tcaacgtcgg cggcacctac ttcctcacca
181 ctcggcagac cctgtgccgg gacccgaaat ccttcctgta ccgcttatgc caggccgatc
241 ccgacctgga ctcagacaag gatgaaacag gcgcctattt aatcgacaga gaccccacct
301 actttgggcc tgtgctgaac tacctgagac acggcaagct ggtgattaac aaagacctcg
361 cggaggaagg agtgttggag gaagcagaat tttacaatat cacctcatta ataaaacttg
421 taaaggacaa aattagagaa cgagacagca aaacatcgca ggtgcctgtg aagcatgtgt
481 accgtgtgct gcagtgccag gaggaggagc tcacgcagat ggtgtccacc atgtccgacg
541 gctggaagtt cgagcagttg gtcagcatcg gctcctctta caactatggg aacgaagacc
601 aagccgagtt cctctgtgtg gtgtccaagg agctgcacaa caccccgtac ggtacggcca
661 gcgagcccag cgagaaggcc aagattttgc aagaacgagg ctcaaggatg tgagggacac
721 agtattgaca gctgaagaaa tgatttacgt tttcccgaga tgtaatgaac tgccatgtcc
781 aggaagcttg gctgtgagaa gaaacctgct tttgatcatt tttctagaga tctgggtgtg
841 aatccttttt tgcctctgag gtgggtggtg agagacgggc ccagctgtcc aaggccagac
901 gtccccaagt tgggggagca cggcggccgg gtgggcgctg cctcttgggg gggcctcgct
961 ctgttttttc caagtgccac gtgggactga ggcagacact cccagtcagc ccgctcgatc
1021 ctgaagatcg tgtgaaggaa gcgttcttgg tgctacacac agtctggaaa agcagcctgg
1081 gcttcactgg caggaagcgg ccgcagccgc gtcagtgtcc agcacgtcgt ggcctctggt
1141 ccgaccacca ggccctagtc tcggtcaggg agtctgctct gcctcccagg cgggatcgct
1201 ggtttctctc gacctcgcag agctcctgac aaaggcggct tctgcgtcgt cactgcttcc
1261 cggcgccatt ccgaggccgg gccttcttct gacacgggct ccaaccccac ctgaccaagc
1321 ccgggacagt caaggcttct caatttgtat tttccaggca agagaacttt gtaccccttc
1381 tctgtgtgga tagactcccc agcgtttttc ctctggaaat gcccacaggg cttgccgcgt
1441 ggagactgat ctgttccatc cgttagcgcg aggtagcagt gtcgcctcgc ccctcccact
1501 gcgggctcac ggggagctgg cgtctgtcag tgccttgtca cgcctggcat agaggttggg
1561 ctggaggcct gtccactggc ttctggagct gaaggtctgc gtcacggtga aaattcggga
1621 tgtttacaga gcatcacaaa tgcctctctc tcgccgctct ctcattttct ttgtataact
1681 atgcagcctt ccctctcttt ctgggatgtt tgggacttca ctcgacctgc acgggctctg
1741 cccgacatgc cgtgggagct gctgggattc ctttagaaac cgctgcccgc atgctttgaa
1801 aacagacctt tctcagctgg ctgtggggac ctgtcagagt ctggggactc ggcgtgcagg
1861 gcgggctcca agcgctttgc ttccggaact ccggcttccc aaggggtact gtgcagactg
1921 accaccggcc tcccgcctgc aggtcagagg ctctgacact gtctggtttc caatgcttct
1981 ggagacttcc tgcctaggcc tcatcctcct ctttgccagt cacctgatta accaattctc
2041 cagcattagg acttacctcc ttctttttgt aaggtctctt gtatgttgtt aaatgtttgg
2101 cttaaacaat ttataaaagc ctttctagaa ggcagactta gccccagcag agcctgggag
2161 gaaggcggcc gctggggctc ctgggcatcc tctctgggga gctgctggcc gcttagcgtt
2221 gtttgatttt tgaccttgac atagtagata ggcttgtggt ttttttaatt taaagatatt
2281 aagacttaat tcactaaaat ttattctaag gggatattta tacttttata cttttttagg
2341 tatcgtattt tatcagctta cagtttaatg cctaagtttc ccctggaaat agcaaataaa
2401 attgtgtatt tatgaaaaaa aaaaaaaaaa aa
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