LOCUS BC007277 2103 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens hydrogen voltage-gated channel 1, mRNA (cDNA clone
MGC:15619 IMAGE:3343102), complete cds.
ACCESSION BC007277
VERSION BC007277.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2103)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2103)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150188.
FEATURES Location/Qualifiers
source 1..2103
/db_xref="H-InvDB:HIT000033113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15619 IMAGE:3343102"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2103
/gene="HVCN1"
/gene_synonym="HV1"
/gene_synonym="MGC15619"
/db_xref="GeneID:84329"
/db_xref="HGNC:HGNC:28240"
CDS 745..1455
/gene="HVCN1"
/gene_synonym="HV1"
/gene_synonym="MGC15619"
/codon_start=1
/product="HVCN1 protein"
/protein_id="AAH07277.1"
/db_xref="GeneID:84329"
/db_xref="HGNC:HGNC:28240"
/translation="MATWDEKAVTRRAKVAPAERMSKFLRHFTVVGDDYHAWNINYKK
WENEEEEEEEEQPPPTPVSGEVIIICLVVLDALLVLAELILDLKIIQPDKNNYAAMVF
HYMSITILVFFMMEIIFKLFVFRLEFFHHKFEILDAVVVVVSFILDIVLLFQEHQFEA
LGLLILLRLWRVARIINGIIISVKTRSERQLLRLKQMNVQLAAKIQHLEFSCSEKEQE
IERLNKLLRQHGLLGEVN"
BASE COUNT 571 a 513 c 468 g 551 t
ORIGIN
1 ctcagactac aggtgtgagc caccatgccc ggccttctcc tttaagtatt gttggcctca
61 ctttcccaac taaaatggga gctcactaag aacaaaggct gttccttcat cttatactta
121 gtaccttgaa agggcctacc acacagtagg tggtcacgtg ttagtctgtt aggtcttttg
181 gattttctag gtagacaatc acatcgattg caaataatag tctttctctt ttcagtcttt
241 gtatttcttt tttcttgttt tattgcattg actgagctca tcagtgaaat gttgaatagt
301 agcaatgatg gagggcaccc caatcttatt atgctcaata ctcattaatt tatgcaatag
361 gaatgtaaag tacctactgc aggtcaaatc ctgtgcctgg ggataacagt gtaacacatt
421 tgagatcttt tcctgtccac tgaaatgcct gagcagtagc agtatttcag taaacacgac
481 aatgctgaga atatcaccaa attctccaga cttgctgaag tgttcctttg ggatcctggt
541 tcccaaaaag tatggacata ggtccctgct ggtggcccca ggttccaggc catcagtaag
601 gttgggggct gcagactgga ccactgcacc gtggagcaga ggtgaagaaa ccaagacgca
661 gagaggccaa gccccttgcc ttgggtcaca cagccaaagg aggcagagcc agaactcaca
721 accagatcca gaggcaacag ggacatggcc acctgggacg aaaaggcagt cacccgcagg
781 gccaaggtgg ctcccgctga gaggatgagc aagttcttaa ggcacttcac ggtcgtggga
841 gacgactacc atgcctggaa catcaactac aagaaatggg agaatgaaga ggaggaggag
901 gaggaggagc agccaccacc cacaccagtc tcaggcgagg tcatcatcat ctgcttggtg
961 gttctggatg ccctcctggt gcttgctgag ctcatcctgg acctgaagat catccagccc
1021 gacaagaata actatgctgc catggtattc cactacatga gcatcaccat cttggtcttt
1081 tttatgatgg agatcatctt taaattattt gtcttccgcc tggagttctt tcaccacaag
1141 tttgagatcc tggatgccgt cgtggtggtg gtctcattca tcctcgacat tgtcctcctg
1201 ttccaggagc accagtttga ggctctgggc ctgctgattc tgctccggct gtggcgggtg
1261 gcccggatca tcaatgggat tatcatctca gttaagacac gttcagaacg gcaactctta
1321 aggttaaaac agatgaatgt acaattggcc gccaagattc aacaccttga gttcagctgc
1381 tctgagaagg aacaagaaat tgaaagactt aacaaactat tgcgacagca tggacttctt
1441 ggtgaagtga actagacccg gaccagctcc cctcaaaaag aagacactgt ctcatgggcc
1501 tgtgctgtca cgagaggaac agctgcccct cctgggccgc ttggtgagag gtttggtttg
1561 atacctctgc ctccctcctg ccagcatgga ttctgggtgg acacagcctt gtggaaggtc
1621 cagtaccacc aagagctgcc catccactcc caccccacac tgtatcaaat gtatcacatt
1681 ttctcatgtt gaacacttta gccttaattg aaaatgagca acaaagctgg acaattgcta
1741 gttgtatata aaatttaatc tcaccgaatg tacagttttc aaatttcacg tgtatattaa
1801 ggaactgatg catctgagca ttctgaaaga aagaaaaaga agctacttta gctgccaccc
1861 cattctagaa aagtctctta ttttcaagct gttctaaata gcttcgtctc agtttcccca
1921 aaaggggtac ccaggcccct cctctgtgtg ccccagctgc atcagccagc ttctaggtgg
1981 ctccattgtt ttctgccacc tgacaacatt tttcctcaat tactgtacaa ctactgtata
2041 aaataaaaca actactgtat aaaataaact ctctcttttc cctggaaaaa aaaaaaaaaa
2101 aaa
//