LOCUS BC007206 1395 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Src homology 2 domain containing transforming protein
D, mRNA (cDNA clone MGC:13052 IMAGE:3628187), complete cds.
ACCESSION BC007206
VERSION BC007206.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1395)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1395)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476327.
FEATURES Location/Qualifiers
source 1..1395
/db_xref="H-InvDB:HIT000033067"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13052 IMAGE:3628187"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1395
/gene="SHD"
/db_xref="GeneID:56961"
/db_xref="HGNC:HGNC:30633"
CDS 226..1248
/gene="SHD"
/codon_start=1
/product="Src homology 2 domain containing transforming
protein D"
/protein_id="AAH07206.1"
/db_xref="GeneID:56961"
/db_xref="HGNC:HGNC:30633"
/translation="MAKWLRDYLSFGGRRPPPQPPTPDYTESDILRAYRAQKNLDFED
PYEDAESRLEPDPAGPGDSKNPGDAKYGSPKHRLIKVEAADMARAKALLGGPGEELEA
DTEYLDPFDAQPHPAPPDDGYMEPYDAQWVMSELPGRGVQLYDTPYEEQDPETADGPP
SGQKPRQSRMPQEDERPADEYDQPWEWKKDHISRAFAVQFDSPEWERTPGSAKELRRP
PPRSPQPAERVDPALPLEKQPWFHGPLNRADAESLLSLCKEGSYLVRLSETNPQDCSL
SLRSSQGFLHLKFARTRENQVVLGQHSGPFPSVPELVLHYSSRPLPVQGAEHLALLYP
VVTQTP"
BASE COUNT 311 a 457 c 384 g 243 t
ORIGIN
1 gcttctcttc ctccctcctc tgtcgcctcc ttttcctccc cctcgttcac cttttccttc
61 cctctatcca tccagagccc cgccaaaggg cgcacctgat ctttctcatc cttccctgct
121 cttcccttcc tctccacctc ctcctcctcc ttggggaaag gggcccggag aagggcatgt
181 gggggcccct ctgacagtgg cccgattggg gtgacaggcg cccaaatggc caagtggcta
241 cgggactacc tgagctttgg gggtcggagg ccccctccgc agccgcccac cccggactac
301 accgagagcg acatcctgag ggcctaccgc gcgcagaaga acctggactt cgaggacccc
361 tatgaggacg cggagagccg cttggagccg gaccccgcgg gccctgggga ctccaagaac
421 cccggagatg ccaagtatgg ttctcccaag caccggctca tcaaggtgga ggctgcggat
481 atggccagag ccaaggccct tctgggcggc cccggggagg agctggaagc cgacactgag
541 tatttagacc cctttgatgc tcagcctcat cctgcacccc cggatgatgg gtacatggag
601 ccctacgatg cccaatgggt catgagtgaa cttcccggca gaggggtgca gctctatgac
661 accccttatg aggaacagga cccagagaca gcagatggac ccccttctgg gcagaagcct
721 cggcagagcc ggatgcccca ggaagatgaa cggccagcag atgagtatga tcagccctgg
781 gagtggaaga aagaccacat ctccagggcg tttgcagtgc agtttgacag tccagagtgg
841 gagaggactc caggctcagc caaggagctc cggagacctc cgcccagaag cccccagcct
901 gcggagcgtg tggacccagc cctgcccctg gagaaacagc cgtggtttca tggccccctg
961 aacagggcgg atgcagagag cctcctgtcc ctctgcaagg aaggcagcta cctagtgcgg
1021 ctcagtgaga ccaaccccca ggactgctcc ttgtctctca ggagcagcca gggcttcctg
1081 catctgaagt tcgcgcggac ccgtgagaac caggtggtgc tgggccaaca cagcgggccc
1141 ttccccagcg tgcccgagct cgtcctccac tacagttcac gcccactgcc ggtgcagggt
1201 gccgagcatc tggctctgct gtaccccgtg gtcacgcaga ccccctgaca gtgaccctcg
1261 gccccctttt gagtcctcgg gcccagaatc gtatcccaaa gccctcccat ggcctagaaa
1321 ataaataagt tattgtttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaacc ccggg
//