LOCUS BC007110 1574 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 54, mRNA (cDNA clone
IMAGE:4291902), partial cds.
ACCESSION BC007110
VERSION BC007110.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1574)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1574)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: n Column: 12.
FEATURES Location/Qualifiers
source 1..1574
/db_xref="H-InvDB:HIT000033056"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4291902"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1574
/gene="C11orf54"
/gene_synonym="PTD012"
/db_xref="GeneID:28970"
/db_xref="HGNC:HGNC:30204"
CDS <1..935
/gene="C11orf54"
/gene_synonym="PTD012"
/codon_start=3
/product="C11orf54 protein"
/protein_id="AAH07110.2"
/db_xref="GeneID:28970"
/db_xref="HGNC:HGNC:30204"
/translation="RSGLWVFCYRDRLVMQKGLKDNFADVQVSVVDCPDLTKEPFTFP
VKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAGPFQTLGF
NSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEKCHDFQCALLANLFASEG
QPGKVIEVKAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPAEF
SSCPLNSDEEVNKWLHFYEMKAPLVCLPVFVSRDPGFDLRLEHTHFFSRHGEGGHYHY
DTTPDIVEYLGYFLPAEFLYRIDQPKETHSIGRD"
BASE COUNT 519 a 261 c 309 g 485 t
ORIGIN
1 gaagatccgg actctgggtg ttttgctacc gtgaccgttt agttatgcag aaggggttaa
61 aagataactt tgctgatgtc caggtctctg tagttgattg ccctgatttg actaaggaac
121 cctttacctt tcctgtaaaa ggcatctgtg ggaaaactag aattgcagaa gttggaggtg
181 tgccttactt attgcctctt gtaaaccaaa aaaaagttta tgatctgaat aaaattgcaa
241 aagaaatcaa gctgcctgga gcctttattc ttggagcagg agcaggtcca tttcagactc
301 tcgggttcaa ttctgagttt atgccagtta ttcagacaga aagtgaacac aagcctcctg
361 taaatggaag ttactttgcc catgtgaacc ctgcagatgg agggtgccta ctggagaaat
421 acagtgagaa atgtcatgat tttcagtgtg cattactggc taatcttttt gccagtgaag
481 gccaacctgg caaggtaatt gaggtgaaag ccaaaagaag aactggacca cttaactttg
541 tgacttgtat gagagagacc ctggaaaaac attatggaaa taagcctata ggaatgggag
601 gtactttcat aattcagaag gggaaagtga agtctcacat tatgcctgca gaattttctt
661 cctgcccctt gaactctgat gaagaagtga ataaatggtt gcatttttat gaaatgaaag
721 ctcctttggt ttgtctacca gtttttgtct ccagagaccc agggtttgat ttgcgactgg
781 agcacactca tttttttagt cgtcatggag aaggtggaca ctaccattat gacactactc
841 cagatatagt ggaatatctt ggatacttct tacctgcaga gtttctctat cgcattgatc
901 aaccaaaaga gacgcattca attgggcgag attaaatcag ctgatactta tttagaaaaa
961 gaaataatta aggttaatta attgattgac ttattaatta atactgatat aaaaccaata
1021 gaaatgatcc cacaggccag gcacaatggc tcatgcctat aatcccagca ctttgggagg
1081 ctgaggcagg aagcacactg gagcccagga gtttgagacc agcttgggca acatagcaag
1141 accctgtcta tttttttaaa aaagtaaaaa atagaaatta tctcactact taaatcccat
1201 ttttttcact tcatatgaaa gaacatattg atagtatatt ctatattatt tcatagatct
1261 gtctgaaaga gattgggaac aaaaatatct aattgagata ttctttaatt ttttacatag
1321 cagctttatt ttttttattc tgtagtatca gcgaaatcag tcatgtttat accttgaata
1381 taaatatcag gaatcatgca attatttcta ctatgtattt agtagtatct tatatttgta
1441 taacattatt acattttgca aattagtatc acaactgcta agtagatgtt tctgagtatt
1501 agaaaaatca gtgttattac ctgcaggata ttaaaaaaca tttgaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaa
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