LOCUS BC007069 2617 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens riboflavin kinase, mRNA (cDNA clone MGC:12524
IMAGE:3997678), complete cds.
ACCESSION BC007069
VERSION BC007069.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2617)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2617)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: l Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725953.
FEATURES Location/Qualifiers
source 1..2617
/db_xref="H-InvDB:HIT000033028"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12524 IMAGE:3997678"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2617
/gene="RFK"
/gene_synonym="FLJ11149"
/gene_synonym="RIFK"
/gene_synonym="RP11-422N19.2"
/db_xref="GeneID:55312"
/db_xref="HGNC:HGNC:30324"
CDS 231..719
/gene="RFK"
/gene_synonym="FLJ11149"
/gene_synonym="RIFK"
/gene_synonym="RP11-422N19.2"
/codon_start=1
/product="riboflavin kinase"
/protein_id="AAH07069.1"
/db_xref="GeneID:55312"
/db_xref="HGNC:HGNC:30324"
/translation="MPRADCIMRHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDN
LPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEIL
NVAIVGYLRPEKNFDSLESLISAIQGDIEEAKKRLELPEHLKIKEDNFFQVSKSKIMN
GH"
BASE COUNT 812 a 445 c 523 g 837 t
ORIGIN
1 acttcggctg tctccgctgc cctccagcgg agacgcagct cctcaggcgc ccggcggtat
61 ttgttgggtc ggcggcgtca gggattcgca gtggcctgtg gtcggcgtcg tccggccact
121 ggtgcgcccc cgcgacaggc agagctcacg ctcctgtccc ccggctggtc cggggtctgg
181 gcgccgcgtc gacggcggct ccgcaggacg cgcagaccgg gccgcagccc atgccccgag
241 cggactgcat tatgaggcac ctgccttact tctgccgggg tcaagtggtg cggggcttcg
301 gccgcggctc caagcagctg ggcatcccca cagctaattt tcctgagcaa gtggtagata
361 atcttccagc tgatatatcc actggtattt actatggttg ggccagtgtt ggaagtggag
421 atgtccataa gatggtggtg agcataggat ggaacccata ttacaagaat acgaagaagt
481 ctatggaaac acatatcatg cataccttca aagaggactt ctatggggaa atcctcaatg
541 tcgccattgt tggctacctg agaccagaaa agaactttga ttctttagag tcacttattt
601 cagcaattca aggtgatatt gaagaagcta agaaacgact agagttacca gaacatttga
661 aaatcaaaga agacaatttc ttccaggttt ctaaaagcaa aataatgaat ggccactgat
721 gaaaaattgt attatttatt cattcactgt tttctagtgt ttctgtgttt attactgttc
781 agcatcatct tggttatata ctgaaaatca aacactttac tacagttgtg aattagttta
841 aaccgtacaa tgttgttatc atatcatgct tcaactatta aattaagccc atcatatcat
901 agcactaaaa agattgagtt aaaaataaga tttaaaaaat atatattgat taaaatgtac
961 cactagaaag gtgttacatg tgtataagta tgggtaaaaa ggcaagtcac tagtttgaga
1021 tgaaaactaa aattttcatg gtaaaatgcc agcatgtatg tacttgtgta gtgtgtactt
1081 ctaaacagag aaggcttata aaagtaaatg cattaaggcc aagtgcagtt gctcacaccg
1141 gtaatcccag cactttggga ggccgaggtg ggaggattgc ttgagctcat gagttcaaga
1201 ccagtctggg caacatagcg agactccatc tctataaata aaaaaaaagg aaatgcatta
1261 aatagaaggt tgatagttta tcataaacct gcggggaaga aactcagact ttctattttt
1321 gatattttgt gcattaatac attacaaaca tgaagatgtt tgtaaagttt tgttttagtc
1381 attttctttg cagtcacatc attgtaccac cttcattatt gtatagagct gcttcaattc
1441 tgagtcctct ggacttcccc tgcctatctg tttgttgttg ttgttgaaga cagtaaaata
1501 agtgttttca aatctatatg tctccttttt gttggataat gtttcttctt tttaatggta
1561 aatattcttg ttcttcaaca tttttctttg gttctttttt ccttttttag gaaaaacaaa
1621 acaacagact tcatccttag gttttctcaa gatttaagtg aacacattta cacatatcaa
1681 tttcttaaag aacacaaaat gtttcctccc tagcaaaact atttaagagc caattaaact
1741 atgaaatagt tataaaatta tttttaatat ttaaggcctt gaaattatat tccaaggcaa
1801 atctaaatgg gtgtagttgt atatgcacga tgtaatttaa tgctaaagag tacttacagc
1861 ttgagggaaa agcataaagt tttagttaaa tagccttcat actgtggatt tttcctccta
1921 ctaactaata tgtgggaaat taagattaca gatgctttgg gccccctcaa acagtacatt
1981 gctacagttc actgtagcaa cagatttggt ggtgatgggg ggatagaggt agaagcagat
2041 agaaggtaat tttaaagtta atttattatg aatcattttc ccctaatctg cataaatgaa
2101 ttagaactga ttttaataaa aatattctgt gtaaaaagta ctcagaaaaa catctaaagc
2161 tgttggagaa gagggactca tataaatagt tggattgcgt tttgcttttt atttctttat
2221 aaaaatatgt caaaaacagt ttttaatttt agaaatctta tacttgaaag aaacctcaat
2281 tatcagtggc tttatgaagt aaagttaaaa acaaacatag gaaatgtgaa aatatttgtg
2341 tttgttttgt ctgactaact tgctgctaaa tgctatcttt aggtgtgtga aagttctttg
2401 atatgttatt gtccttttac atcttgttaa atagccattg cttttgagaa tcagatagtg
2461 tgttgtttag gggttaattg tgtctatatc tttcaaaaac ttttatatta tgtattataa
2521 gaagttacag tagtaccatt ttgattagtc tgaatgtttt caggccttga aataaatttt
2581 gactaagtaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//