LOCUS BC007035 1313 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear transcription factor Y, beta, mRNA (cDNA clone
MGC:12399 IMAGE:3996244), complete cds.
ACCESSION BC007035
VERSION BC007035.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1313)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1313)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45597173.
FEATURES Location/Qualifiers
source 1..1313
/db_xref="H-InvDB:HIT000033000"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12399 IMAGE:3996244"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1313
/gene="NFYB"
/gene_synonym="CBF-A"
/gene_synonym="CBF-B"
/gene_synonym="HAP3"
/gene_synonym="NF-YB"
/db_xref="GeneID:4801"
/db_xref="HGNC:HGNC:7805"
/db_xref="MIM:189904"
CDS 129..752
/gene="NFYB"
/gene_synonym="CBF-A"
/gene_synonym="CBF-B"
/gene_synonym="HAP3"
/gene_synonym="NF-YB"
/codon_start=1
/product="nuclear transcription factor Y, beta"
/protein_id="AAH07035.1"
/db_xref="GeneID:4801"
/db_xref="HGNC:HGNC:7805"
/db_xref="MIM:189904"
/translation="MTMDGDSSTTDASQLGISADYIGGSHYVMQPHDDTEDSMNDHED
TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEAS
ERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIGGAVTATDG
LSEELTEEAFTNQLPAGLITTDGQQQNVMVYTTSYQQISGVQQIQFS"
BASE COUNT 452 a 187 c 273 g 401 t
ORIGIN
1 caaccaaaca gccgattgga gacgggagcc aaccagggct gcattggagg ttgaaatcac
61 aaagattaga caccttttta gataggtgtt cttcagcacc actgacaaca cggttctgac
121 agtatttcat gacaatggat ggtgacagtt ctacaacaga tgcttctcaa ctaggaatct
181 ctgcagacta tattggagga agtcattatg ttatgcagcc tcatgatgat actgaggaca
241 gcatgaatga tcatgaagac acaaatggtt caaaagaaag tttcagagaa caagatatat
301 atcttccaat agcaaacgtg gctaggataa tgaaaaatgc catacctcaa acgggaaaga
361 ttgcaaaaga tgccaaagaa tgtgttcaag aatgtgtaag tgagttcatc agttttataa
421 catctgaagc aagtgaaagg tgccatcaag agaaacggaa aacaatcaat ggagaagata
481 ttctctttgc tatgtctact ttaggctttg acagttatgt ggaacctctg aaattatacc
541 ttcagaaatt cagagaggct atgaaaggag aaaagggaat tggtggagca gtcacagcta
601 cagatggact aagtgaagag cttacagagg aggcatttac taaccagtta ccagctggct
661 taataaccac agacggtcaa caacaaaatg ttatggttta cacaacatca tatcaacaga
721 tttctggtgt tcagcaaatt cagttttcat gatctgaaga aatgatggaa tggggagtgt
781 agagaaatga gagtctgtat gattctggaa cagagacatc agaaggaaag actggtgaaa
841 agatgtatct ttgtatatta atagctgtaa tgtagcttcc tgatgcttga ctaattgagg
901 tgttaattct gacttgagaa tctttttcat gaatgatttt aaagaaaaat ttggatttta
961 aaggtattaa aatatttttg ttttgtacga gagtttgttg ctctgtatga ctcctgtatg
1021 cattgtatat tgcaatttat tactgtcaga gatttgtaga cagtttctta ttttcatatt
1081 gaatcatgtt acttttgtaa ttcaagtaag cggctgggtt aattcatgat gtttgccctt
1141 ttaataaaat ataagggtag agttcatttt gaatgcaagt tgcctttatt ataaatttga
1201 gtttgtcttg gttatacctt gcatgataac ctagctagat ttctagcatt tgctgtattt
1261 attaaaatta ttattttttt gataaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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