LOCUS BC007019 1218 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens vesicle-associated membrane protein 4, mRNA (cDNA
clone MGC:12355 IMAGE:3961237), complete cds.
ACCESSION BC007019
VERSION BC007019.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1218)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1218)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544206.
FEATURES Location/Qualifiers
source 1..1218
/db_xref="H-InvDB:HIT000032990"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12355 IMAGE:3961237"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1218
/gene="VAMP4"
/gene_synonym="VAMP24"
/db_xref="GeneID:8674"
/db_xref="HGNC:HGNC:12645"
/db_xref="MIM:606909"
CDS 215..637
/gene="VAMP4"
/gene_synonym="VAMP24"
/codon_start=1
/product="vesicle-associated membrane protein 4"
/protein_id="AAH07019.1"
/db_xref="GeneID:8674"
/db_xref="HGNC:HGNC:12645"
/db_xref="MIM:606909"
/translation="MPPKFKRHLNDDDVTGSVKSERRNLLEDDSDEEEDFFLGPSGPR
FGPRNDKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSK
QLRRQMWWRGCKIKAIMALVAAILLLVIIILIVMKYRT"
BASE COUNT 398 a 226 c 250 g 344 t
ORIGIN
1 gatcggctcg atgagcggag gcgctgctgc ggcgctgcgg ccgacgccgg gtccgcacca
61 actgtctccc cctcccagct tcttacctcg gcttcctact ccttcccccg cccgcccagc
121 accgccagcc cgggagagct gccgggagtt ccccgggagc ctcaggtggt gactatcctg
181 ttgagaagca aaagatactt tgcaagtaaa aaatatgcct cccaagttta agcgccacct
241 caatgatgat gatgtcacag gttctgtgaa aagtgaaagg agaaatcttt tggaagatga
301 ttcagatgaa gaagaggact tttttctggg accatctgga ccaagatttg gacctagaaa
361 tgataaaatt aagcatgttc agaatcaagt ggatgaagtt attgatgtca tgcaagaaaa
421 tattacaaag gtaattgaga gaggggagag actagatgaa ctacaggaca aatcagaaag
481 cttatcggat aatgcaacag cttttagcaa cagatccaaa caacttcgaa ggcaaatgtg
541 gtggcgtgga tgcaaaataa aagccatcat ggctttggtt gctgctatcc ttttgctagt
601 gattatcatt cttatagtca tgaaataccg tacttgattt gatgacagag atcttcatta
661 aacaagatct gggacagtaa taaaagattg ctgcataatt taaatgaaac ctatgtgtat
721 ataactttca aaacttcttt ttcaagaaac taagaggcaa gtatcacttc aaattggaac
781 gttgagaatg tccaattatc ttctcccttt ctaacaaaat gttcttttaa taattatgtt
841 taaggcaaag agaactagcc tctatttttc catatttcaa ggatctaatt tgaaactaga
901 tacttgccag ttcattattt gtgtatataa acactgatta taatatttca tattaatatt
961 ttaatggcat aaggacttgc attattgcat tagggagcgg gtcatgctgg gggtcaggaa
1021 gcctgtgtag agtaccaaat tatatgctga aagagatgca taaccattct gtcaatattt
1081 gcagaaatat agttcctttc atattacagt tgttttgcaa gcaatttcca catttatagg
1141 tgtaacaaaa gctaaatgtt gtaaatgttg ttgccctcag gtataactaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaa
//