LOCUS BC007007 1142 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interleukin 18 (interferon-gamma-inducing factor),
mRNA (cDNA clone MGC:12321 IMAGE:3686124), complete cds.
ACCESSION BC007007
VERSION BC007007.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27502389.
FEATURES Location/Qualifiers
source 1..1142
/db_xref="H-InvDB:HIT000032980"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12321 IMAGE:3686124"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1142
/gene="IL18"
/gene_synonym="IGIF"
/gene_synonym="IL-18"
/gene_synonym="IL-1g"
/gene_synonym="IL1F4"
/gene_synonym="MGC12320"
/db_xref="GeneID:3606"
/db_xref="HGNC:HGNC:5986"
/db_xref="MIM:600953"
CDS 196..777
/gene="IL18"
/gene_synonym="IGIF"
/gene_synonym="IL-18"
/gene_synonym="IL-1g"
/gene_synonym="IL1F4"
/gene_synonym="MGC12320"
/codon_start=1
/product="interleukin 18 (interferon-gamma-inducing
factor)"
/protein_id="AAH07007.1"
/db_xref="GeneID:3606"
/db_xref="HGNC:HGNC:5986"
/db_xref="MIM:600953"
/translation="MAAEPVEDNCINFVAMKFIDNTLYFIAEDDENLESDYFGKLESK
LSVIRNLNDQVLFIDQGNRPLFEDMTDSDCRDNAPRTIFIISMYKDSQPRGMAVTISV
KCEKISTLSCENKIISFKEMNPPDNIKDTKSDIIFFQRSVPGHDNKMQFESSSYEGYF
LACEKERDLFKLILKKEDELGDRSIMFTVQNED"
BASE COUNT 387 a 237 c 234 g 284 t
ORIGIN
1 tttgctcccc tggcgactgc ctggacagtc agcaaggaat tgtctcccag tgcattttgc
61 cctcctggct gccaacgctg gctgctaaag tggctgccac ctgctgcagt ctacacagct
121 tcgggaagag gaaaggaacc tcagaccttc cagatcgctt cctctcgcaa caaactattt
181 gtcgcaggaa taaagatggc tgctgaacca gtagaagaca attgcatcaa ctttgtggca
241 atgaaattta ttgacaatac gctttacttt atagctgaag atgatgaaaa cctggaatcc
301 gattactttg gcaagcttga atctaaatta tcagtcataa gaaatttgaa tgaccaagtt
361 ctcttcattg accaaggaaa tcggcctcta tttgaagata tgactgattc tgactgtaga
421 gataatgcac cccggaccat atttattata agtatgtata aagatagcca gcctagaggt
481 atggctgtaa ctatctctgt gaagtgtgag aaaatttcaa ctctctcctg tgagaacaaa
541 attatttcct ttaaggaaat gaatcctcct gataacatca aggatacaaa aagtgacatc
601 atattctttc agagaagtgt cccaggacat gataataaga tgcaatttga atcttcatca
661 tacgaaggat actttctagc ttgtgaaaaa gagagagacc tttttaaact cattttgaaa
721 aaagaggatg aattggggga tagatctata atgttcactg ttcaaaacga agactagcta
781 ttaaaatttc atgccgggcg cagtggctca cgcctgtaat cccagccctt tgggaggctg
841 aggcgggcag atcaccagag gtcaggtgtt caagaccagc ctgaccaaca tggtgaaacc
901 tcatctctac taaaaataca aaaaattagc tgagtgtagt gacccatgcc ctcaatccca
961 gctactcaag aggctgaggc aggagaatca cttgcactcc ggaggtggag gttgtggtga
1021 gccgagattg caccattgcg ctctagcctg ggcaacaaca gcaaaactcc atctcaaaaa
1081 ataaaataaa taaataaaca aataaaaaat ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aa
//