LOCUS BC006990 1563 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein phosphatase 6, catalytic subunit, mRNA (cDNA
clone MGC:12249 IMAGE:3684339), complete cds.
ACCESSION BC006990
VERSION BC006990.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1563)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1563)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127429.
FEATURES Location/Qualifiers
source 1..1563
/db_xref="H-InvDB:HIT000032970"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12249 IMAGE:3684339"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1563
/gene="PPP6C"
/db_xref="GeneID:5537"
/db_xref="HGNC:HGNC:9323"
/db_xref="MIM:300141"
CDS 69..986
/gene="PPP6C"
/codon_start=1
/product="protein phosphatase 6, catalytic subunit"
/protein_id="AAH06990.1"
/db_xref="GeneID:5537"
/db_xref="HGNC:HGNC:9323"
/db_xref="MIM:300141"
/translation="MAPLDLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPV
STPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAK
WPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQIL
CVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGA
KVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKD
VNTREPKLFRAVPDSERVIPPRTTTPYFL"
BASE COUNT 439 a 321 c 313 g 490 t
ORIGIN
1 ctccgccgct gccgccgccg ctgctacagc cgccgccgcc gctgttgccg cggcttgtta
61 ttcttaaaat ggcgccgcta gacctggaca agtatgtgga aatagcgcgg ctgtgcaagt
121 acctgccaga gaacgacctg aagcggctat gtgactacgt ttgtgacctc ctcttagaag
181 agtcaaatgt tcagccagta tcaacaccag taacagtgtg tggagatatc catggacagt
241 tttatgacct ttgtgaactg ttcagaactg gaggtcaggt tcctgacaca aactacatat
301 ttatgggtga ttttgtagac agaggttact atagtttgga gaccttcact taccttcttg
361 cattaaaggc taaatggcct gatcgtatta cacttttgcg aggaaatcat gagagtagac
421 agataacaca ggtctatgga ttttatgatg agtgccaaac caaatatgga aatgctaatg
481 cctggagata ctgtaccaaa gtttttgaca tgctcacagt agcagcttta atagatgagc
541 agattttgtg tgtccatggt ggtttatctc ctgatatcaa aacactggat caaattcgaa
601 ccatcgaacg gaatcaggaa attcctcata aaggagcatt ttgtgatctg gtttggtcag
661 atcctgaaga tgtggatacc tgggctatca gtccccgagg agcaggttgg ctttttggag
721 caaaggtcac aaatgagttt gttcatatca acaacttaaa actcatctgc agagcacatc
781 aactagtgca cgaaggctat aaatttatgt ttgatgagaa gctggtgaca gtatggtctg
841 ctcctaatta ctgctatcgt tgtggaaata ttgcttcgat catggtcttc aaagatgtaa
901 atacaagaga accaaagtta ttccgggcag ttccagattc agaacgtgtt attcctccca
961 gaacgacaac gccatatttc ctttgaggcc ttcgcccatc ctgctgaccc atttttctgc
1021 cctcttctta ccccaatttt cttgtattac cctctacaat atacttttta ttgagcactt
1081 tgctgctgaa atgctgcctc ttgccttttt tttttttaaa ttttaaatta tctaaattta
1141 ttgtttgttg tggtgtctat agcaaagttt ttctatcaat tttcccccat cccatcccca
1201 ccctggactc atttgagaag acttgagaaa tgtcttaata ctcacactgc tgcatgtagc
1261 tcttgcttat ttactggtct gggaaacagg atgtgtttcc ttttttttaa aagccaattg
1321 acagattaca cctaaatact cctccttttg tatcattcag ccttttgttt tagtttggta
1381 agttttaaga aatttcagca gcaaagttgt tattcagtgg gcacgatgga ctccaaatgc
1441 ctcaagttat gtatacctgt cccagatgta aacttcattg tcctttgttg gatgatattt
1501 taaatggata taaaataaat tggtctaaag gacaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaa
//