LOCUS BC006543 1911 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA
(cDNA clone MGC:2389 IMAGE:2824199), complete cds.
ACCESSION BC006543
VERSION BC006543.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1911)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1911)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC006543.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331232.
FEATURES Location/Qualifiers
source 1..1911
/db_xref="H-InvDB:HIT000032913"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2389 IMAGE:2824199"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1911
/gene="CCT5"
/gene_synonym="CCT-epsilon"
/gene_synonym="CCTE"
/gene_synonym="KIAA0098"
/gene_synonym="TCP-1-epsilon"
/db_xref="GeneID:22948"
/db_xref="HGNC:HGNC:1618"
/db_xref="MIM:610150"
CDS 36..1661
/gene="CCT5"
/gene_synonym="CCT-epsilon"
/gene_synonym="CCTE"
/gene_synonym="KIAA0098"
/gene_synonym="TCP-1-epsilon"
/codon_start=1
/product="chaperonin containing TCP1, subunit 5 (epsilon)"
/protein_id="AAH06543.1"
/db_xref="GeneID:22948"
/db_xref="HGNC:HGNC:1618"
/db_xref="MIM:610150"
/translation="MASMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAV
ANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEI
GDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIK
DTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGR
LEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKA
LQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIA
IATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNK
MIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRA
FADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIE
TLIGKKQQISLATQMVRMILKIDDIRKPGESEE"
BASE COUNT 576 a 387 c 490 g 458 t
ORIGIN
1 gccggttggg ggaaagtaat tccggctgtt gcaccatggc gtccatgggg accctcgcct
61 tcgatgaata tgggcgccct ttcctcatca tcaaggatca ggaccgcaag tcccgtctta
121 tgggacttga ggccctcaag tctcatataa tggcagcaaa ggctgtagca aatacaatga
181 gaacatcact tggaccaaat gggcttgata agatgatggt ggataaggat ggggatgtga
241 ctgtaactaa tgatggggcc accatcttaa gcatgatgga tgttgatcat cagattgcca
301 agctgatggt ggaactgtcc aagtctcagg atgatgaaat tggagatgga accacaggag
361 tggttgtcct ggctggtgcc ttgttagaag aagcggagca attgctagac cgaggcattc
421 acccaatcag aatagccgat ggctatgagc aggctgctcg cgttgctatt gaacacctgg
481 acaagatcag cgatagcgtc cttgttgaca taaaggacac cgaacccctg attcagacag
541 caaaaaccac gctgggctcc aaagtggtca acagttgtca ccgacagatg gctgagattg
601 ctgtgaatgc cgtcctcact gtagcagata tggagcggag agacgttgac tttgagctta
661 tcaaagtaga aggcaaagtg ggcggcaggc tggaggacac taaactgatt aagggcgtga
721 ttgtggacaa ggatttcagt cacccacaga tgccaaaaaa agtggaagat gcgaagattg
781 caattctcac atgtccattt gaaccaccca aaccaaaaac aaagcataag ctggatgtga
841 cctctgtcga agattataaa gcccttcaga aatacgaaaa ggagaaattt gaagagatga
901 ttcaacaaat taaagagact ggtgctaacc tagcaatttg tcagtggggc tttgatgatg
961 aagcaaatca cttacttctt cagaacaact tgcctgcggt tcgctgggta ggaggacctg
1021 aaattgagct gattgccatc gcaacaggag ggcggatcgt ccccaggttc tcagagctca
1081 cagccgagaa gctgggcttt gctggtcttg tacaggagat ctcatttggg acaactaagg
1141 ataaaatgct ggtcatcgag cagtgtaaga actccagagc tgtaaccatt tttattagag
1201 gaggaaataa gatgatcatt gaggaggcga aacgatccct tcacgatgct ttgtgtgtca
1261 tccggaacct catccgcgat aatcgtgtgg tgtatggagg aggggctgct gagatatcct
1321 gtgccctggc agttagccaa gaggcggata agtgccccac cttagaacag tatgccatga
1381 gagcgtttgc cgacgcactg gaggtcatcc ccatggccct ctctgaaaac agtggcatga
1441 atcccatcca gactatgacc gaagtccgag ccagacaggt gaaggagatg aaccctgctc
1501 ttggcatcga ctgtttgcac aaggggacaa atgatatgaa gcaacagcat gtcatagaaa
1561 ccttgattgg caaaaagcaa cagatatctc ttgcaacaca aatggttaga atgattttga
1621 agattgatga cattcgtaag cctggagaat ctgaagaatg aagacattga gaaaactatg
1681 tagcaagatc cacttctgtg attaagtaaa tggatgtctc gtgatgcgtc tacagttatt
1741 tattgttaca tccttttcca gacactgtag atgctataat aaaaatagct gtttggtaac
1801 catagtttca cttgttcaaa gctgtgtaat cgtgggggta ctatctcaac tgcttttgta
1861 ttcattgtat taaaagaatc tgtttaaaca aaaaaaaaaa aaaaaaaaaa a
//