LOCUS BC006488 1774 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat and SOCS box-containing 3, mRNA (cDNA
clone MGC:996 IMAGE:3537359), complete cds.
ACCESSION BC006488
VERSION BC006488.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1774)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1774)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC006488.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22208950.
FEATURES Location/Qualifiers
source 1..1774
/db_xref="H-InvDB:HIT000032870"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:996 IMAGE:3537359"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1774
/gene="ASB3"
/gene_synonym="ASB-3"
/gene_synonym="FLJ10123"
/gene_synonym="FLJ10421"
/gene_synonym="MGC12531"
/gene_synonym="MGC996"
/db_xref="GeneID:51130"
/db_xref="HGNC:HGNC:16013"
/db_xref="MIM:605760"
CDS 15..1571
/gene="ASB3"
/gene_synonym="ASB-3"
/gene_synonym="FLJ10123"
/gene_synonym="FLJ10421"
/gene_synonym="MGC12531"
/gene_synonym="MGC996"
/codon_start=1
/product="ankyrin repeat and SOCS box-containing 3"
/protein_id="AAH06488.1"
/db_xref="GeneID:51130"
/db_xref="HGNC:HGNC:16013"
/db_xref="MIM:605760"
/translation="MDFTEAYADTCSTVGLAAREGNVKVLRKLLKKGRSVDVADNRGW
MPIHEAAYHNSVECLQMLINADSSENYIKMKTFEGFCALHLAASQGHWKIVQILLEAG
ADPNATTLEETTPLFLAVENGQIDVLRLLLQHGANVNGSHSMCGWNSLHQASFQENAE
IIKLLLRKGANKECQDDFGITPLFVAAQYGKLESLSILISSGANVNCQALDKATPLFI
AAQEGHTKCVELLLSSGADPDLYCNEDSWQLPIHAAAQMGHTKILDLLIPLTNRACDT
GLNKVSPVYSAVFGGHEDCLEILLRNGYSPDAQACLVFGFSSPVCMAFQKDCEFFGIV
NILLKYGAQINELHLAYCLKYEKFSIFRYFLRKGCSLGPWNHIYEFVNHAIKAQAKYK
EWLPHLLVAGFDPLILLCNSWIDSVSIDTLIFTLEFTNWKTLAPAVERMLSARASNAW
ILQQHIATVPSLTHLCRLEIRSSLKSERLRSDSYISQLPLPRSLHNYLLYEDVLRMYE
VPELAAIQDG"
BASE COUNT 523 a 341 c 392 g 518 t
ORIGIN
1 gactggtcaa acaaatggat tttacagagg cttacgcgga cacgtgctct acagttggac
61 ttgctgccag ggaaggcaat gttaaagtct taaggaaact gctcaaaaag ggccgaagtg
121 tcgatgttgc tgataacagg ggatggatgc caattcatga agcagcttat cacaactctg
181 tagaatgttt gcaaatgtta attaatgcag attcatctga aaactacatt aagatgaaga
241 cctttgaagg tttctgtgct ttgcatctcg ctgcaagtca aggacattgg aaaatcgtac
301 agattctttt agaagctggg gcagatccta atgcaactac tttagaagaa acgacaccat
361 tgtttttagc tgttgaaaat ggacagatag atgtgttaag gctgttgctt caacacggag
421 caaatgttaa tggatcccat tctatgtgtg gatggaactc cttgcaccag gcttcttttc
481 aggaaaatgc tgagatcata aaattgcttc ttagaaaagg agcaaacaag gaatgccagg
541 atgactttgg aatcacacct ttatttgtgg ctgctcagta tggcaagcta gaaagcttga
601 gcatacttat ttcatcgggt gcaaatgtca attgtcaagc cttggacaaa gctacaccct
661 tgttcattgc tgctcaagag ggacacacaa aatgtgtgga gcttttgctc tccagtgggg
721 cagatcctga tctttactgt aatgaggaca gttggcagtt acctattcat gcagctgcac
781 aaatgggcca tacaaaaatc ttggacttgt taataccact tactaaccgg gcctgtgaca
841 ctgggctaaa caaagtaagc cctgtttact cagcagtgtt tgggggacat gaagattgcc
901 tagaaatatt actccggaat ggctacagcc cagacgccca ggcgtgcctt gtttttggat
961 tcagttctcc tgtgtgcatg gctttccaaa aggactgtga gttctttgga attgtgaaca
1021 ttcttttgaa atatggagcc cagataaatg aacttcattt ggcatactgc ctgaagtacg
1081 agaagttttc gatatttcgc tactttttga ggaaaggttg ctcattggga ccatggaacc
1141 atatatatga atttgtaaat catgcaatta aagcacaagc aaaatataag gagtggttgc
1201 cacatcttct ggttgctgga tttgacccac tgattctact gtgcaattct tggattgact
1261 cagtcagcat tgacaccctt atcttcactt tggagtttac taattggaag acacttgcac
1321 cagctgttga aaggatgctc tctgctcgtg cctcaaacgc ttggattcta cagcaacata
1381 ttgccactgt tccatccctg acccatcttt gtcgtttgga aattcggtcc agtctaaaat
1441 cagaacgtct acggtctgac agttatatta gtcagctgcc acttcccaga agcctacata
1501 attatttgct ctatgaagac gttctgagga tgtatgaagt tccagaactg gcagctattc
1561 aagatggata aatcagtgaa actacttaac acagctaatt tttttctctg aaaaatcatc
1621 gagacaaaag agccacagag tacaagtttt tatgatttta tagtcaaaag atgattattg
1681 attgtgagat aggttaggtt ttggggggcc agtagttcag tgagaatgtt tatgtttaca
1741 actagccttc ccagtaaaaa aaaaaaaaaa aaaa
//