LOCUS BC006479 1434 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 50, mRNA (cDNA clone
MGC:4376 IMAGE:2823374), complete cds.
ACCESSION BC006479
VERSION BC006479.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1434)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1434)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147360.
FEATURES Location/Qualifiers
source 1..1434
/db_xref="H-InvDB:HIT000032863"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4376 IMAGE:2823374"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1434
/gene="C19orf50"
/gene_synonym="FLJ25480"
/gene_synonym="MGC2749"
/gene_synonym="MST096"
/gene_synonym="MSTP096"
/db_xref="GeneID:79036"
/db_xref="HGNC:HGNC:28420"
CDS 143..673
/gene="C19orf50"
/gene_synonym="FLJ25480"
/gene_synonym="MGC2749"
/gene_synonym="MST096"
/gene_synonym="MSTP096"
/codon_start=1
/product="chromosome 19 open reading frame 50"
/protein_id="AAH06479.1"
/db_xref="GeneID:79036"
/db_xref="HGNC:HGNC:28420"
/translation="MDLPDSASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEM
LLNFNNLSSARLQQMSERFLHHTRTLVEMKRDLDSIFRRIRTLKGKLARQHPEAFSHI
PEASFLEEEDEDPIPPSTTTTIATSEQSTGSCDTSPDTVSPSLSPGFEDLSHVQAGSP
AINGRSQTDDEEMTGE"
BASE COUNT 332 a 435 c 393 g 274 t
ORIGIN
1 acgcacgcaa gcggctccag ggtacgtccc cgccacgcgc gctcgcagga tcggtgcgtg
61 gtgacgtttc gccggcgcgg gcgccatccc ggaagcgcga gcaaggccgc cagatgtgca
121 ggcagcggag gaggagaaag agatggacct cccggactcg gcctcgaggg tcttctgcgg
181 ccgcatcctg agcatggtga acacagatga tgtcaacgcc atcatcctgg cccagaagaa
241 catgctggac cgctttgaga agaccaatga gatgctgctc aacttcaaca acctgtccag
301 tgcccgcctg cagcagatga gcgaacgctt cctgcaccac acgaggaccc tagtagagat
361 gaaacgggac ctggacagca tcttccgccg tatcaggacg ctgaaaggga aactggccag
421 gcagcaccca gaggccttca gccatatccc agaggcatcc ttcctggagg aagaggatga
481 agaccccatc ccacccagca ccacgaccac cattgccacc tcagaacaga gcacgggctc
541 atgtgacacc agccccgaca ccgtctcgcc ctccctgagc cccggcttcg aggacctgtc
601 ccatgtccag gctggctccc cagccatcaa cggccgcagc cagacagatg acgaggagat
661 gacgggcgaa tagccctgct gcccggtgcc ttgagggggt ctcagggcag cagcatacaa
721 ggtggcagcg ggtaaccctg ccttgttctg tcatccaggg ctcctttgct gccccgttct
781 gtcacccagg gctcctaggg ggacaaggct ctctcccgag gggtgtggaa ttcctggggg
841 ggtctttaat tctggctcct tccttcctca gaacatctct attctgcaag acccctctgc
901 catgccaggg cacgcccatt ccagctggag tcgtggggct gggcacaggg gaatttttcc
961 agagctgagc ctgacgtctg ctctgaagaa tgcttagaag gttcccagac accagagcca
1021 gatgtccccc accaccggtc aggacctcct tgaggtgcac aagcacggtc tcctctgagt
1081 tcaccccagc ccacccccgc acccactaat tctgcttttc ctgccccttg ctccgtaaaa
1141 gtatcaaata ctttctcctt ggtatctcaa ggaggtttct gagataggta gaagtcttga
1201 gacggaggct ggccatccat tcagccctga gcgtgctgag ttctgtgttt ctctgaatag
1261 aggtgtggaa cctgaggggc cagcaggcct ctctgaaggc ctccatggag caaacggagc
1321 cacctcggga aagagtttaa tggaatattt ttgtacccga tgtttacaga tgctgttggg
1381 aagttatcaa taaaaagaca ccattactaa aaagggaaaa aaaaaaaaaa aaaa
//