LOCUS BC006478 1779 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens calbindin 1, 28kDa, mRNA (cDNA clone MGC:4352
IMAGE:2822391), complete cds.
ACCESSION BC006478
VERSION BC006478.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1779)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1779)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5579451.
FEATURES Location/Qualifiers
source 1..1779
/db_xref="H-InvDB:HIT000032862"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4352 IMAGE:2822391"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1779
/gene="CALB1"
/db_xref="GeneID:793"
/db_xref="HGNC:HGNC:1434"
/db_xref="MIM:114050"
CDS 173..958
/gene="CALB1"
/codon_start=1
/product="calbindin 1, 28kDa"
/protein_id="AAH06478.1"
/db_xref="GeneID:793"
/db_xref="HGNC:HGNC:1434"
/db_xref="MIM:114050"
/translation="MAESHLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELQ
QARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEE
FMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDG
KLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDL
CEKNKQDLDINNITTYKKNIMALSDGGKLYRTDLALILCAGDN"
BASE COUNT 578 a 353 c 357 g 491 t
ORIGIN
1 ctctggagga acgctgagct gagcagcacc gaggacagcg cccggcagcg cccgcgccca
61 ggtctccctc cgcagccctg actcgcgcac acgctgagct tttgctcact ccccttcgcg
121 cggacacaga cacacgcata ttcacacacc cagacacaca ccccgctgta caatggcaga
181 atcccacctg cagtcatccc tcatcacagc ctcacagttt ttcgagatct ggctccattt
241 cgacgctgac ggaagtggtt acctggaagg aaaggagctg cagaacttga tccaggagct
301 ccagcaggcg cgaaagaagg ctggattgga gttatcacct gaaatgaaaa cttttgtgga
361 tcagtatggg caaagagatg atggaaaaat aggaattgta gagttggctc acgtattacc
421 cacagaagag aatttcctgc tgctcttccg atgccagcag ctgaagtcct gtgaggaatt
481 catgaagaca tggagaaaat atgatactga ccacagtggc ttcatagaaa ctgaggagct
541 taagaacttt ctaaaggacc tgctagaaaa agcaaacaag actgttgatg acacaaaatt
601 agccgagtat acagacctaa tgctgaaact atttgattca aataatgatg ggaagctgga
661 attaactgag atggccaggt tactaccagt gcaggagaat tttcttctta aattccaggg
721 aatcaaaatg tgtgggaaag agttcaataa ggcttttgag ctgtatgatc aggacggcaa
781 tggatacata gatgaaaatg aactggatgc tttactgaag gatctgtgcg agaagaataa
841 acaggatctg gatattaata atattacaac atacaagaag aacataatgg ctttgtcgga
901 tggagggaag ctgtaccgaa cggatcttgc tcttattctc tgtgctgggg ataactagag
961 ttggtggccg caaccacttg ctagtgatac actgtatcta aaaaataact gtgcactata
1021 agggagtagg ctgtattttc ttttatatct gtaaatttaa ctgcatatag ataattatcc
1081 aggatgtgtg gctcattctt ttcagcttgt ttctatactg tttgtaatat acagtttttg
1141 taaccatatg attgaaaaga agaaagtcta tgcttaggcc agtcagtaca cccaatttta
1201 aaaaataaca tattcttgct ttcacaaata tagttgaaca agatttccct aaaaattcca
1261 ccaggattaa tctctaaaat tctagtctct gatttgcaaa tgcacatttg tcactgaata
1321 atggaattat gtataacaag ccaaacattc ttattttaga caaccataga actgtcccac
1381 aaaatatttc taagcttatt tctaactatt aggaggaatg tgcttttcca tctaaaatac
1441 tcaccaaaat atagttaatt gtggctttat gaagttaaca gtctcattac agatttagtt
1501 taccaatcaa cagcatgtct actgcttgga tccatacaaa actatcggtt caagttgatg
1561 tgacaaggga agggagcacc agatgacaca taaatctgtc tgattctatg cctgtatttc
1621 caacaaactt actgtcagag aatatgacct aaatccattt tctaaactgt tttcatgtgt
1681 tgcaaattat tctagtcaac tgctgtttta tgtcatactc tgtgtaatct ctgattaaat
1741 ttaatatact gcaaaaaaaa aaaaaaaaaa aaaaaaaaa
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